KEGG   Solanum tuberosum (potato): 102589616
Entry
102589616         CDS       T02981                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102589616
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sot03041]
    102589616
   03400 DNA repair and recombination proteins [BR:sot03400]
    102589616
Spliceosome [BR:sot03041]
 Complex B
  Other components
   Prp19 complex
    102589616
 Complex C
   Prp19-CDC5 complex
    102589616
DNA repair and recombination proteins [BR:sot03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    102589616
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect
Other DBs
NCBI-GeneID: 102589616
NCBI-ProteinID: XP_006361426
UniProt: M1ATK6
LinkDB
Position
Un
AA seq 986 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACTKDENYDPNDDPR
KLKPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIDVRQRKRKRRGIDYNAEIPFEKKPPPGFYDITEEDRPVDQPKFPT
TIEELEGERRVDKEARLRKQDVARNKIAERQDAPTSILHANKLNDPEAVRKRSKLNLPAP
QIPDHELEAIAKIGIASDLIGGDELSEGNAATRALLANYAQTPQHAMTPMRTPQRTPSTK
QDSIMMEAENQRRLTQSQTPLLGGDNPLLHPSDFSGVTPKKREVQTPNPLLTPSATPGAT
SLTPRIGMTPSRDSYGMTPKGTPMRDELHINEEMDMHNNAKLGQFNSKKELLSGLKSLPQ
PKNEYQIVVQQPPEENEEPEEKIEEDMSDRIAREKAEEEAKRQALLRKRSKVLQRELPRP
PIASLELIKSSLMRADEDKSSFVPPTLIEQADEMIRKELVSLLEHDNTKYPLDEKPEKEK
KKGVKRKIVAEPAIEDFEEDELKEADGLIKDEAHFLRVAMGHESESLDEFVEVHKTTLND
IMYFPTRNAYGLSSVAGNMEKLAALQNEFENVKKKMDDDTKKATKLEQKIKVLTNGYQIR
AGKLWSQIESTFKKMDTAGTELECFRALQKQEQLAASHRINNMWEEVQKQKELERTLQKR
YGDLIADTQKIQHLMDEYRIQDQMQEEIAAKNRALELAKAEIAEKESIPSADDVEPSGTV
QCSNTEENSASASHVPIEADVHAEPSGTDQCSNAEENSASIEADNVHVEPSGTSQCPIAE
ETSASVSHDTTPQDVEGQVQVADVSTMDAEALSDHVPMEGQQNLVEESNTDVTKTEDSTV
AAGDVDTKTDDSVVVAGDGEADPKNM
NT seq 2961 nt   +upstreamnt  +downstreamnt
atgaggattatgataaagggaggagtatggaagaacacggaggatgagattctgaaggcg
gctgtgatgaagtatgggaagaatcagtgggctcgtatttcttctttgcttgttcgtaaa
tctgctaagcagtgtaaagctcgctggtatgaatggctcgatccttcaattaagaagact
gaatggactagagaggaggatgaaaaactacttcaccttgcaaaactcatgcccactcaa
tggaggacaattgcgccaattgttggccgtacaccatcacagtgccttgaacgttatgag
aagcttctcgatgcagcatgtactaaggatgagaactatgatcctaatgatgatccaaga
aaattgaagcctggagagattgatcctaacccggaatccaagcctgctcgtcctgatcct
gttgatatggatgaggacgagaaagaaatgctttctgaagcacgggctcggttggccaac
acaagaggcaagaaggctaaaaggaaagccagagaaaagcagcttgaagaggcgcgaagg
cttgcttctttacagaagaggagagaactcaaggctgctggaatagatgtccgtcaaagg
aagagaaaaaggagaggtattgattacaatgctgaaatcccctttgaaaagaagcctcct
ccaggtttctatgatatcactgaggaagaccgtccagttgatcaacctaagtttccaact
accattgaggaactggaaggtgaaaggagagtcgataaggaagctcgcctaagaaagcag
gatgttgcgaggaataaaattgcagaaaggcaggatgcccctacatccatattgcatgcg
aacaaacttaatgatccagaagcagtgaggaagaggtcgaaactgaatcttcctgcacca
cagattccagatcatgaattggaggccatagcaaagataggtattgccagtgatctaata
gggggtgatgaactgtccgaagggaatgctgcaacgcgtgctcttcttgcaaattatgcc
cagacaccacagcatgcaatgactcctatgcgaacacctcaaagaaccccatcaactaag
caagactctattatgatggaagcagaaaatcaacgaagattgactcaatctcaaacacca
ttacttggaggtgataatcctttgttgcacccctcagatttctcgggtgtcactcccaag
aaaagggaggttcaaactccaaacccacttttaactccatcagcgactcctggagccacg
agccttactcctagaattggcatgacaccttcgagagattcttatgggatgacacccaaa
ggaactcccatgagggatgagctacacattaatgaagaaatggatatgcataataatgct
aaactggggcaatttaattcaaaaaaagaattgctttctggtttgaaaagccttcctcag
cccaagaatgagtaccagatagtcgtccaacaacctcctgaagaaaatgaagaaccagaa
gagaagatcgaagaagacatgtctgataggattgccagggagaaggctgaagaagaagca
aagcgacaggcattactccgtaaaaggtcaaaagtattgcaaagggagctccctagacct
cccattgcttctctagaactaataaagagttccttaatgagagctgatgaagacaagagc
tcctttgttcctcctacactaattgagcaggctgatgaaatgattagaaaggaacttgtg
tccttgctagaacatgataataccaagtaccctctagatgagaagccagagaaggagaag
aaaaagggggtcaagcgaaaaattgttgctgaacctgctattgaggattttgaggaagat
gaattaaaagaggctgatggattgatcaaggatgaagctcactttcttcgtgtggcaatg
ggacatgagagtgaatctcttgatgaatttgtcgaagtacacaaaacaactttgaatgat
atcatgtactttcctacccggaatgcttatggtctctcaagtgttgctggaaacatggaa
aagctggctgctttgcagaatgagtttgagaatgtgaagaagaaaatggatgatgatact
aagaaagcaacaaaacttgagcaaaagatcaaagttcttactaatggatatcagatacga
gctggaaaactttggtcacagatagagtcaacctttaagaaaatggacactgcagggaca
gagcttgaatgcttccgagcattacaaaaacaagagcagctagcagcatcccacaggatc
aacaatatgtgggaagaagttcagaagcaaaaggagcttgagcgtactttacagaaaagg
tacggtgacctcatagcagatacgcaaaagatccagcatctcatggatgagtatagaata
caagatcaaatgcaggaagaaatcgcagcaaaaaatcgtgctcttgagttggccaaggca
gaaattgcagaaaaggagagtataccatctgctgatgatgtggaaccttcaggtaccgta
cagtgctccaatacagaggaaaattctgcttctgcctctcatgtaccaatagaagctgat
gtgcatgcagagccttcaggtaccgaccagtgctctaatgctgaggaaaattctgcttct
attgaagctgataatgtgcatgtggagccctcaggtactagccagtgccccattgcagag
gaaacttctgcttctgtctctcatgacacaactcctcaagacgttgagggacaggtgcaa
gtggctgacgtttccacaatggatgctgaagccctaagtgaccatgtacctatggagggt
cagcaaaacctagtagaggagagtaatacagatgtcactaaaacagaagactctacagta
gcagcaggtgacgtggatactaaaacagacgactctgtagtagtagcaggtgatggtgag
gctgatcccaaaaacatgtaa

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