Solanum tuberosum (potato): 102589639
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Entry
102589639 CDS
T02981
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102589639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sot03032
]
102589639
03400 DNA repair and recombination proteins [BR:
sot03400
]
102589639
DNA replication proteins [BR:
sot03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
102589639
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
102589639
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
LIG3_BRCT
ECT2_BRCT0
TopBP1_BRCT0
Motif
Other DBs
NCBI-GeneID:
102589639
NCBI-ProteinID:
XP_006345369
LinkDB
All DBs
Position
Un
AA seq
990 aa
AA seq
DB search
MMTTKVFNGANAFMSRNLVPPEQFDALHDALKLNGAQVLLCCDPSRNAPTDYHVISSPQH
EKFGDLQAKGCNLIGPQCILSCAKEQRPLPQQGFTCCLAMDGVKILASGFEMDEKVEIGK
LVIAMGGVLQTKASLDVSFVIVKNVLAAKYKWAYNILKKPIVTINWLHQCWKEHRLVPQE
SFKILPFSGLTISVTRVPADERKDMEKIILQNGGKYSPELTRKCSHLICDVPEGDKFKVA
KRWGCIHTVTKRWFEQSVARRACLNEESYPVQAGSNTLSTVRMTNQHSLEKGIRNLQGLS
SLATASSAEPVFCSRVADSDLEATLSQNMSATSSYAPVFTKEPENSPAEYPKSDYSAPVS
TKGKKSGASTEQENNGCDGVVADDSETDDNDLYLADCRILIVGFNASEMRKLVNLVRKGG
GSRYMSFSEKLTHIIAGNPSENEIKELRNLAALGVIHVVKSGWLEDCDRENKEVPVLRKH
IAYDLLLPKDPIHCSNGAAITTTMKRQGKSYVHPMSSDEQAWRSRDSRCAMPSYENKELE
NMNDVRTSLGENGVQHQPYASNGKEEFKIPNESSCAVNGRKPSSVFEGRQFCFSASFPAD
RRAEIVEWVNQGGGVVVKDQNDTNVHFTVECHGMLRSEKAGAATTFVSSHWIKSCLEDGC
LLDVGNHILYSPLPCRVPFPAFKSFRLCVSQYDEKERQLLRNLCFTIGAKFVEKLTKKVT
HLLCKFTDGPKYEAACKWGIQPVTCEWIYECINQNKIVSADPFYPKEVTSEDREAGACTV
SQFPTQAFGMISGDTASQPLQELVNVRTEAFAGRSTAKEEKKYSSRWNKKARLLVVEEPK
CSLPCSPKESNAFCGASPPEKNLTGSTNEGSSAVPDVAAAIEDLLEQTSKIHDQKSPSRS
ECDKELFTSGCNNLAQAHGDHHATLGLSNHWTNRFEKEDETQSHSGDATANVYDHFSETQ
TDSQVVGYAEDLSGRQMIIDRVRTRSSGLT
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgacgaaggtgtttaacggagcaaatgccttcatgtcgcgtaatctcgtcccg
ccggagcaattcgacgcgcttcacgacgcgctcaagctcaacggagctcaagtcttactc
tgttgcgatccttcacggaatgctcccactgattatcatgtcatttcttctccccagcat
gagaagtttggggatcttcaagctaagggctgcaacttgataggtcctcagtgcatactt
tcctgtgccaaagaacagaggccactaccccagcaggggtttacttgttgccttgcaatg
gatggggtcaaaatcctggcatctggttttgagatggatgaaaaggttgaaatcggaaag
ttggtgattgcaatgggaggagtcctgcagacaaaagcatcattggatgtgagctttgtt
attgtgaagaatgttttggctgcaaagtataagtgggcttacaacattctaaagaaacca
attgtcactattaattggctccatcaatgctggaaagaacaccgtcttgttcctcaggag
tcattcaaaatccttcctttttctgggttgacaatttctgtcaccagagttcctgcagat
gagagaaaggatatggaaaagattatcttgcaaaatggcggaaaatactctcctgagctg
accagaaagtgctcacatttaatttgtgatgttccagaaggtgacaaattcaaggttgcc
aaaagatggggttgcatacacactgttaccaaaaggtggtttgaacaatctgttgcaaga
cgagcatgtcttaatgaggagtcgtatcctgttcaggctggttcaaatactttgagcacc
gttagaatgacaaatcagcatagtctggaaaagggcatcagaaacctacaagggttgtcc
tccttggctacggcatcgagtgcagaacctgttttctgcagtcgagtggctgattcagat
ctggaagctaccctctcgcaaaatatgtctgctacatcttcatatgctccagtgtttaca
aaggagccggagaactcacctgctgagtacccaaagagtgattacagtgctcctgtctct
acaaagggcaagaaaagtggagcatctacagagcaggaaaataatggttgtgatggtgtt
gttgccgatgactctgaaacagatgacaatgatctttatttggcagattgcagaatccta
atcgttggttttaatgcatctgaaatgcgaaaacttgtcaacctagtccgaaaaggtggt
ggttctcgttacatgtctttcagtgaaaagttgacacacataatagctggaaatccatca
gagaatgagatcaaagaattaagaaaccttgcggctttgggtgtcattcatgtggtaaag
tcaggatggctggaggattgtgatcgtgagaataaagaagttcctgttctaaggaagcat
attgcttatgatttacttcttccgaaagatcctattcactgtagtaacggagctgcaatc
acgacgactatgaaaagacaaggaaaatcctatgtgcatcctatgtcttctgatgaacaa
gcatggagaagcagggattctagatgtgcaatgccatcatacgaaaacaaagaactagaa
aatatgaatgacgttagaacttctttgggagagaacggggttcaacatcagccctatgct
tctaatggtaaagaagagttcaagataccgaatgaatccagttgtgctgttaatggtaga
aagccatctagcgtgttcgagggaaggcaattttgcttttcagcttcatttcctgctgat
cggagagctgaaattgttgagtgggttaatcaagggggaggagtggtggtcaaagatcag
aatgatacaaatgtgcatttcactgtcgagtgtcatggtatgttgcgttccgagaaagct
ggtgctgcgactacttttgtatcaagtcactggattaagtcttgtctggaggatggatgc
ttgctggatgttggtaatcacatcctctattctccacttccatgccgagttcctttccct
gcattcaagagttttcgcttatgtgtttcacagtatgatgagaaagaaagacagctgcta
agaaatttgtgttttactattggagccaaatttgttgagaaattaactaaaaaggtcaca
catttgttgtgtaaatttaccgatggcccgaaatatgaggctgcatgtaagtggggaata
caaccagtcacttgtgagtggatttatgagtgtatcaatcagaacaaaattgtttctgca
gatccattttatcctaaagaagtcacctctgaagatcgagaagctggggcatgcacggtg
agccagttccccacacaagcttttgggatgatatctggtgataccgcgtcccagccgctc
caagaacttgtaaatgtgagaactgaagcttttgctggtagaagtactgcaaaggaagaa
aagaagtattcaagcagatggaataagaaggctaggctcttggtggttgaagaacccaaa
tgttcattgccctgctcaccaaaagaaagtaatgcattctgtggggcaagtcccccagaa
aagaacctgacaggaagtactaatgaaggttcttctgcagttcctgacgtagctgctgct
atagaggacttattggagcaaacaagcaagatccatgatcaaaagtctccatcgagaagc
gagtgtgataaagaactttttacatctggttgtaacaatcttgctcaagctcatggagat
catcatgctacgcttggattatctaaccactggacaaacaggtttgagaaagaggatgaa
acccagagtcattcaggagatgcaactgcaaatgtgtacgatcactttagtgaaacacag
acggactctcaggttgttggatatgcagaagatttgtctggaagacaaatgattattgat
agagtacgaacaaggagttctggattgacttga
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integrated database retrieval system
