KEGG   Solanum tuberosum (potato): 102589663
Entry
102589663         CDS       T02981                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
sot  Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:sot00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sot03400]
    102589663
DNA repair and recombination proteins [BR:sot03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    102589663
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4 zf-C3HC4_3 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 DEAD Prok-RING_4 RING_XB3-XBAT31 zf-C3HC4_4 zf-RING_5 ResIII zf-RING_4 zf-ANAPC11 zf-P11 zf-Di19
Other DBs
NCBI-GeneID: 102589663
NCBI-ProteinID: XP_006349075
LinkDB
Position
Un
AA seq 1066 aa
MAGIKVTEELVSMVRSIVGDEYTQMDIIRSLHMAKNDPTAAINIIFDTPSFKKIEIRNTH
LNSEAGNVSSNSGKIKEAEISTVSSNEGLDTESEFGDNGLVGKRAGCDMGSECGSNGLVG
KRAGCDLGSECGSNGLVGKRAGCDMGSEWWYVGCGEVAGMSTCKGRILKPGDEVDFTFPV
EKKLSSPSPGKFGGGRGRQAAACSEIVRFSTKACGEIGRIPNEWARCILPLVRDKKIRIE
GCCKSAPNILGIMDSVLLSVRVHINSSMFRKSHQTSLKARSNPADDTVVHPLPTLFHLLG
LTPFKKAEFTPADLYMRKRPLNEQDSSGGPASLLRANLSKSSSSADGDKVEDDESISDTD
LDCIVGLADSSKLQEMEPPTTLQCELRPYQKQALHWMTQLERGRNTDEAATTLHPCWNAY
RLKDKRELVVYLNAFSGDATTEFPSTLEMARGGILADSMGLGKTIMTISLLLSHSERGGS
SGSQSTSQLSSENGEASNILGHSPTFAKKSAKFSSLDKLLKHKPILISGGNLIICPMTLL
GQWKAEIEAHAQPGALSVYVYYGQTRSKDAKVLARSDVVLTTYGVLASEFSAENAEDSGG
LLSIRWFRVVLDEAHTIKSSKSQISNAAAALIADRRWCLTGTPIQNNLEDIYSLLRFLRV
EPWGSWAWWNKLIQKPFEEGDERGLKLVQSILSLIMLRRTKSSTDREGRPILVLPPADIQ
VIYCELTEAERDFYDALYKRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMS
RGDTQEFSDLNKLAKRFLKGGKETGEGKDVPSRAYIQEVVEELRNGEQGECPICLEAFED
AVLTPCAHRLCRECLLASWRSSNSGLCPVCRNTVSRQELITAPSDNRFQVDVEKNWVESS
KVSALLFELKRLHSVGSKSIVFSQWTAFLDLLQIPLSCSSIPFVRLDGTLNQQQREKVIK
KFSEEDDISVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRVHRIGQTKQVMI
KRFIVKGSVEERMEAVQARKQRMISGALTDQEVRTARIEELKMLFA
NT seq 3201 nt   +upstreamnt  +downstreamnt
atggcggggatcaaagtcactgaggagcttgtttcaatggtgcgttcaattgttggcgat
gaatatacacagatggacataattagatcccttcacatggcgaaaaacgatcctacagct
gcaataaacatcattttcgacaccccgagtttcaagaaaattgaaattcgcaatacccat
ttgaattcggaagctgggaatgttagtagtaatagtggtaagatcaaagaggctgagatt
agtacagtttcttcaaatgagggattggatactgaaagtgaatttggggataatgggttg
gtgggtaagagggctgggtgtgatatggggagtgaatgtgggagtaatggtttggtgggt
aagagggctgggtgtgatttggggagtgaatgtgggagtaatgggttggtgggtaagaga
gctggatgtgatatggggagtgaatggtggtatgtggggtgtggtgaggttgctggtatg
tcaacttgtaaagggaggattttgaagcctggtgatgaagttgattttacgttcccagtg
gagaagaaattgagttcaccttcacctggaaagtttggaggtggacgagggcgtcaagca
gctgcgtgttctgaaattgtaaggttttctacaaaggcttgtggagagattgggcgtatt
ccaaatgaatgggctcgatgtattctgcctctggtgagggataaaaagattagaattgaa
ggatgttgcaaatcggcccctaatatattagggattatggactctgttcttttgtctgtc
agagtgcatattaacagttccatgtttcgcaaaagccatcagacatcactaaaggcaaga
agcaatcccgcagatgatacagttgttcacccccttccgactttgttccatttgcttggg
cttactccttttaagaaggcagaatttactccagctgatttatacatgaggaagcggcca
ttgaacgaacaggacagctccggaggtcctgcctcattattgcgtgcaaacttatccaaa
agctcctcatctgcagacggagataaagttgaggatgatgaatcaatttctgatactgat
cttgactgtattgttggtttagctgatagctcgaagctacaggaaatggaaccaccaact
acgctccagtgcgaactgcgaccctatcagaagcaggcgcttcattggatgacacaactg
gagaggggaagaaacacggatgaagcagcaacaactctgcatccatgttggaatgcttac
cgcctgaaagacaagagggagcttgttgtttacttgaatgcattttcgggtgatgcgacc
actgaatttccaagtacccttgaaatggctagaggaggaattttggcagattccatgggg
ctagggaagactataatgactatatctctcctcctcagtcattctgaaagaggtggatca
tcaggaagccaatctacaagtcagctgtctagtgaaaatggagaagctagtaatatctta
ggtcattctccaacttttgcgaagaaatcagcaaaattctctagtcttgataagcttctg
aaacataagccgatacttatctctggtggcaatctaattatatgtccaatgacactacta
ggtcaatggaaggcagagattgaagcccatgcacaacctggggctctatctgtttatgtt
tactatgggcagacaagatcaaaggatgcaaaagtgcttgctcgaagtgatgtcgtgcta
acgacatatggggtgttggcctccgaattttctgccgagaatgctgaggacagtgggggc
cttctctctattagatggtttagagtggttcttgatgaggcacatactatcaaatcctct
aaaagccaaatctcaaatgctgccgctgctcttattgctgaccgtcggtggtgtcttact
ggtacccctatccagaacaatctggaggatatttacagtctactaagatttttgagagtc
gaaccatggggaagctgggcatggtggaacaagcttattcagaaaccttttgaggaggga
gatgagagggggctaaagttggttcaatcaatattaagtctgattatgttgagaagaaca
aagtctagtacagatagagaaggaagaccaattttagttctaccaccagcagatattcaa
gtgatatattgtgaacttacagaagcagagcgcgacttctatgatgctttgtataaaaga
tccaaggtgaagtttgatcagtttgttgagcaaggacgggttctccacaactatgcttct
atattggagttgcttttgcgacttcgtcaatgttgtgaccatccgtttcttgtcatgagt
cgaggtgatactcaagaattctctgatctgaataagcttgctaaacgtttccttaagggt
ggtaaggagactggagaaggcaaggatgtcccttcacgtgcttatattcaggaggttgtg
gaagagttgcggaatggagaacagggtgaatgccctatttgtcttgaagcttttgaagat
gcggtgttgactccatgtgctcataggttatgtcgagagtgtctcttggcaagctggcga
agttctaattcaggcctctgtcctgtttgtagaaacactgtcagtaggcaggagcttata
acagccccgtcagacaaccgctttcaggttgatgttgaaaagaattgggtggagtcatca
aaagtatcagccttgttgtttgaattaaaacgtcttcattctgttggctccaaaagcatt
gtttttagtcagtggactgccttcttagatctactgcagattcctctttcttgtagtagt
attccatttgttcgccttgatgggacgttaaaccaacaacaacgtgagaaagttataaag
aagttctcagaagaggatgacatatcggtgttgctaatgtcattgaaggctggtggtgtt
gggataaacctgacggctgcatctaatgcttttgtcatggatccttggtggaatccagct
gttgaggagcaagcggtcatgcgtgttcatcgtattggacaaactaagcaagtaatgatc
aaacgattcattgtgaagggttcagtagaggaaagaatggaggcagtccaagctaggaag
caacggatgatttctggtgctttgaccgaccaagaagttcggactgcaagaatcgaggaa
ctcaagatgctttttgcatag

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