Solanum tuberosum (potato): 102589746
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Entry
102589746 CDS
T02981
Name
(RefSeq) pre-mRNA-splicing factor syf2-like
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102589746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sot03041
]
102589746
Spliceosome [BR:
sot03041
]
Complex B
Other components
Prp19-related factors
102589746
Complex C
102589746
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYF2
Motif
Other DBs
NCBI-GeneID:
102589746
NCBI-ProteinID:
XP_006363753
UniProt:
M1APP9
LinkDB
All DBs
Position
Un
AA seq
298 aa
AA seq
DB search
MSDERRVHPNCGNGSNPYHECSEYCFKIIAAIKKQMIKAETCVLQANTVDVHRSDAPDER
DGVESHSDDGEDNMGEESVNLITGRKRKLFELRLKMNVARKANQSAMVVEKKKTEAPPAE
CRGMSKQQWIEERKKKIGNLLDAKGLDMSKAYMLDTQESAETKYKKWEKEPAPAGWDVFN
KKTLYNAYKKRTKNVDVDVDEYNRMKETVPEFYREASSLQYGKAPKLSDEKIERMVKELK
DRDEKRQSFSRRRKFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLERGSALPD
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgaaagaagagttcacccaaattgtgggaatggttcgaacccttatcatgaa
tgcagtgaatattgcttcaaaataatagcggcaataaagaagcaaatgatcaaagctgaa
acatgtgtgttgcaagctaatactgttgatgttcatcgctccgatgcacctgatgaaaga
gatggtgttgaaagtcacagtgatgatggagaggataatatgggagaagagtcggtgaat
ctgataacagggaggaagaggaagttatttgaattgaggttaaaaatgaatgtggcaaga
aaagctaatcaatctgcaatggtagtagagaagaaaaaaacagaagctccccctgcagag
tgtagaggaatgtccaagcaacaatggattgaagagaggaagaagaaaatcgggaatttg
ttggatgccaaagggttagatatgagcaaggcatatatgctagatacacaagagtctgca
gagacaaagtataagaaatgggagaaggagcctgctccagctggttgggatgtttttaat
aagaagacgctatacaatgcatacaagaagcggacaaagaatgttgatgttgatgtagat
gagtacaatagaatgaaggaaactgttccagaattttatcgagaagcttcaagtctccag
tatggaaaggcaccaaaattgtcagacgaaaagatagagaggatggtgaaggagctaaag
gacagggacgagaagcgccaatcatttagtcggaggagaaagttccatgaagagaaagac
attgactctattaatgatcgtaacgagcatttcaataaaaagattgagcgtgcctttgga
aaatacaccttggagatcaagaataaccttgagagaggatctgctttgcctgattga
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