Solanum tuberosum (potato): 102589752
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Entry
102589752 CDS
T02981
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B
KO
K07466
replication factor A1
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03030
DNA replication
sot03420
Nucleotide excision repair
sot03430
Mismatch repair
sot03440
Homologous recombination
sot03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102589752
03420 Nucleotide excision repair
102589752
03430 Mismatch repair
102589752
03440 Homologous recombination
102589752
03460 Fanconi anemia pathway
102589752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sot03000
]
102589752
03032 DNA replication proteins [BR:
sot03032
]
102589752
03400 DNA repair and recombination proteins [BR:
sot03400
]
102589752
Transcription factors [BR:
sot03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
102589752
DNA replication proteins [BR:
sot03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
102589752
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
102589752
MMR (mismatch excision repair)
102589752
DSBR (double strand breaks repair)
HR (homologous recombination)
102589752
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
PGAP1_3rd
Rhabdo_glycop_CD
Motif
Other DBs
NCBI-GeneID:
102589752
NCBI-ProteinID:
XP_006345121
UniProt:
M1CAH7
LinkDB
All DBs
Position
Un
AA seq
614 aa
AA seq
DB search
MAKTVSPDAISTILANPSPDSSSDLPEIIVQVVDLKPTGNRYMFSANDGKMKIKGILQSS
LSSEVISGSIQNLGLIRIIDYTLNDIPTKNEKYLIVTKCESVSPALEAEYKAEVKSEDTG
IVLKPKQEETGILLKPKQEYQTKSAAQIVHEQSGNMAPSARMAMTRRIQPLVSLNPYQGN
WTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAAKKFFDKFELGKVY
YISKGTLRVANKQFKTVQNDYEMTLNETSQVEEACNEEAFIPETKFNFVPIDELGPYVNG
RELVDVIGVVQSVSPTMSIRRKSNNETVPKRDITIADETKKTVVVSLWNDLATHVGQELL
DMADKSPVVAIKSLKVGDFQGVSLSALSKSNIVVNPDLPEAKKLRSWYDSEGKETSLASI
GSGMSPSAKSGARSMYTDRVSLLHITSNLSLGEEKPVFFSLKAYISFIKPDQTMWYRACK
TCNKKVTEAFGSGYWCEGCQKNEAECSLRYIMALKVSDASGEAWLSTFNEQAEKILGCSA
DELDKLKSEEGEIAYQMKLKEATWVPHLFRVSVAPQEYNNEKRQRITVRAIAPVDYAAES
KYLLEEMSKMNIAM
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaacggtcagcccagatgctatttcaactattttagcgaacccatcgccggat
tcttcttcagatcttcctgaaattattgttcaagtagtggatctcaagcccaccggcaac
agatacatgttttcagccaatgatgggaaaatgaagattaagggcattcttcaatctagt
ttgtcttctgaagttatatctgggtctatacagaacctgggtcttattcggattattgat
tacaccctcaatgatatcccaactaagaatgaaaagtacttgattgtaactaaatgtgag
tcagtgtctcctgctcttgaagctgagtacaaggctgaagtgaaaagtgaagacactggc
attgtcttgaagccaaagcaggaagagactgggattcttttgaaaccaaaacaggaatat
caaactaaatctgctgctcaaattgtacatgaacaaagtggaaacatggcaccgtctgct
cgaatggcaatgacaagaagaattcagccacttgtctctttgaatccctaccaaggaaat
tggaccattaaggttcgagtaactagcaagggtaatatgcgaacttacaagaatgctcgt
ggagaaggctgtgtgttcaatgttgaattgactgatgaggatggtacccaaatacaagct
acaatgtttaatgaagctgcaaagaagttttttgacaagtttgaattggggaaagtatat
tacatttcaaagggaactcttcgagttgcgaacaagcagttcaaaactgtacaaaatgat
tatgagatgactttgaatgaaacttcccaagttgaggaggcttgcaacgaagaagctttt
attccagagacaaaatttaactttgtcccaattgatgaattgggaccatatgtcaatggc
agggagcttgttgatgttattggggtggtccaaagtgtatctccaacaatgagcatacgg
aggaagagtaacaatgagacagtccctaagcgtgatataactattgcagatgagacgaag
aagactgttgttgtttctctttggaatgatcttgccacccatgttggacaagaactgcta
gacatggctgataaatccccagttgttgcaatcaaatcccttaaagttggagacttccaa
ggagtgtctttatcagcattaagcaaaagcaatattgttgtgaatcctgatttacctgaa
gccaaaaaattgagatcttggtatgattctgaaggtaaagaaacttcattggcatctatt
ggttctggcatgagcccctctgccaagagtggagcaagatctatgtatactgatagagtt
tccttgcttcatataaccagtaacctgtcccttggcgaggagaagcctgtgtttttcagc
ttgaaagcatatataagtttcattaagcctgatcaaaccatgtggtatcgggcttgcaag
acatgcaacaagaaagttactgaagcttttgggtctggatattggtgtgaaggatgccag
aagaatgaagcagagtgtagtttgagatatataatggcattgaaagtgtctgatgcaagt
ggtgaagcatggctttctacgtttaatgagcaagcagagaaaatacttggatgctctgct
gatgaacttgacaagctgaaatcagaggagggagaaattgcatatcaaatgaaattgaag
gaagctacatgggttcctcaccttttccgggtcagtgttgcaccacaagagtacaacaac
gagaaaaggcaaaggataacagtcagggctattgctccagttgattatgcagcagaatcc
aaatacttgctggaagaaatgtctaagatgaacattgctatgtaa
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