Solanum tuberosum (potato): 102590709
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Entry
102590709 CDS
T02981
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102590709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102590709
03110 Chaperones and folding catalysts [BR:
sot03110
]
102590709
03029 Mitochondrial biogenesis [BR:
sot03029
]
102590709
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sot04147
]
102590709
Enzymes [BR:
sot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
102590709
Messenger RNA biogenesis [BR:
sot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
102590709
Chaperones and folding catalysts [BR:
sot03110
]
Heat shock proteins
HSP60 / Chaperonin
102590709
Mitochondrial biogenesis [BR:
sot03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
102590709
Exosome [BR:
sot04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102590709
Exosomal proteins of other body fluids (saliva and urine)
102590709
Exosomal proteins of breast cancer cells
102590709
Exosomal proteins of colorectal cancer cells
102590709
Exosomal proteins of bladder cancer cells
102590709
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Flavoprotein
Motif
Other DBs
NCBI-GeneID:
102590709
NCBI-ProteinID:
XP_006340914
UniProt:
M1ATY8
LinkDB
All DBs
Position
Un
AA seq
575 aa
AA seq
DB search
MYRFAANLASKARVARISSQQIGGRFNWSRNYAAKDIRFGVEARALMLQGVEQLADAVKV
TMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKIQNVGASLVKQVANATNDVAGDGT
TCATVLTRAIFAEGCKSVAAGMNAMDLRRGITMAVDSVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGDLIARAMEKVGKEGVITIQDGKTLLNELDVVEGMKLDRGYISPYFITNQK
NQKCELDNPLILIHEKKISSVNAVVKALELALKRQRPLLIVAEDVDNEALATLILNKLRA
GIKVCAIKAPGFGENRKAYLQDLAILTGGQVITEELGLNIENLEFEMLGTSKEATISKDD
TVILDGAGKKKSIEERCELIRSTIEQSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYAARELDNLTTANFDQKIGVQIIQNALKT
PVHTIASNAGVEGAVVVGKLLDQDNLDLGYDAAKGEYVDMIKAGIIDPVKVIRTALVDAA
SVSSLLTTTEAVVVELPKDEKESPAMGGGMGGMDF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgttttgcagcaaatcttgcttctaaagccagagttgcaagaatcagttcccaa
cagattggtgggaggttcaattggagtagaaactatgctgcaaaggatatcagatttgga
gttgaagctagagctttgatgcttcaaggtgttgagcagcttgctgatgctgttaaagtc
actatgggtccaaaggggcgtaatgtggtgattgaacaaagttggggtgcacccaaagta
acaaaagatggcgtgactgttgcaaaaagtattgaattcaaggacaagatacaaaatgtt
ggtgctagccttgtaaaacaagtcgccaatgcaacgaatgatgttgctggtgatggtacc
acttgtgcaacagtcctcacccgagcaatatttgctgaaggatgcaagtcagtggcagct
ggtatgaatgcaatggaccttagacggggtattaccatggctgtagattctgttgtgaca
aacctgaaaagcagagcacggatgatcagtacatctgaggaaattgcacaggttgggact
atctctgcaaacggagaaagagaaattggcgacctaattgcaagggctatggagaaagta
ggcaaggagggagtcatcactattcaagacgggaagacattgctcaatgaattggatgtt
gttgaagggatgaagttggatagaggttacatatcaccatacttcatcacaaatcagaag
aatcagaaatgtgaactggataacccactaattctgattcatgagaaaaagatctcaagc
gttaatgctgttgtgaaagcattggagttagctctgaagagacaaaggcccctcttaatt
gtggctgaagatgtggacaatgaagcactcgccactcttattttgaacaaactccgtgct
ggaatcaaggtttgtgccatcaaagcaccaggctttggtgaaaacaggaaagcttatttg
caagatcttgctattttaactggaggccaagtcataacagaagagcttggactgaacatt
gaaaatttggagttcgagatgctgggaacaagtaaagaggcgactatctctaaggatgat
actgtcattcttgatggtgctggtaagaagaagtccatagaggaacgatgtgaactgatt
agatcaaccattgaacagagcacatctgactatgacaaggagaagttgcaggaaagacta
gctaagctttcagggggtgttgctgtgttaaagattggaggtgccagtgaagctgaggtt
ggtgaaaagaaagatagagtaactgatgctttgaatgccacaaaggctgcagtggaggaa
ggaattgttccaggtggtggtgttgctcttctttatgcagcaagagaattggataatttg
acaacagccaactttgaccagaagattggtgtacaaattattcagaatgctctgaagaca
ccagtacatacaatagcctctaacgcaggagtagagggtgctgtcgtggttggtaaactg
ttggatcaggacaaccttgatcttggatatgatgcggccaagggtgaatatgtagatatg
ataaaggcagggattatcgatccagtgaaagtgattaggacagctttggttgatgctgcc
agcgtctcgtctctcttgaccacaactgaagcagttgttgtcgagcttcctaaggatgag
aaggaatctcctgcaatgggtggcggtatgggtggcatggacttctaa
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integrated database retrieval system
