Solanum tuberosum (potato): 102590902
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Entry
102590902 CDS
T02981
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot00040
Pentose and glucuronate interconversions
sot01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102590902
Enzymes [BR:
sot01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
102590902
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
VasX_N
Motif
Other DBs
NCBI-GeneID:
102590902
NCBI-ProteinID:
XP_006354410
LinkDB
All DBs
Position
Un
AA seq
486 aa
AA seq
DB search
MFQRSCIVVFLILTSFFPFAFGIFLNVTTLPGQHPDPEAVALEVNRKVNASLSIFQSRRK
MLSYTSSDQSSCQTGNPIDDCWRCDHSWQLNRQRLADCAIGFGQYALGGKGGRYYVVTSS
SDPDPVNPPPGTLRYGVIQEEPLWIVFSANMEIKLSEELIFNSHKTLDGRGVNVHITGGG
CITLQYISNVIIHNIHVHHCYESGYTNVRSSPTHFGYRGKSDGDGISIFGSRDIWIDHCS
LSNCKDGLIDVVMGSTGITISNNHFSHHNEVMLLGHSDDYLPDSGMQVTISFNHFGKKLI
QRMPRCRRGYIHVVNNDFTRWEMYAIGGSGNPTINSQGNRYIAPFDPFAKEVTKRVDTDE
GKWRNWNWRSEGDVMANGAYFVASGEEVEVKYEKAYSVEPKSADFIDQITLNAGVLIHRG
SNSGKWTAATNNDTESAGDDGGGEDLVAISGDSDDDYGGDEESRSSTIYSNFSLLFNFLM
TLLALL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaagaagctgcattgtggttttcttgattttaacttcattttttccttttgct
tttgggattttcttgaatgtcactactcttcctggtcagcatcctgatcctgaagctgtt
gctcttgaagttaataggaaagtgaatgcatcactctcaattttccaatcaagaagaaaa
atgttgtcctacacaagtagtgaccaatcctcttgtcaaacgggcaaccctatcgatgat
tgttggcgatgtgaccatagttggcaattaaatcgccaaagactagccgattgcgccatc
ggttttggtcaatacgccctcggtgggaaaggcggacgttactacgtggtcacctcatcc
tcggaccccgaccccgtgaacccgccacctggcactcttcgatacggagtcatccaagag
gaaccgttatggatagtattctcagccaatatggagattaaactctcggaagaactcatt
ttcaactcgcacaaaaccctagacggacgtggggtcaacgtgcacataacgggagggggt
tgcataacgttacaatatatctccaacgttataatccacaacatacacgtacatcattgt
tacgaatcgggctatacgaacgtacgttcgagccctacacattttggataccgaggcaag
tcggacggggacggaatctcgattttcgggtcacgagacatatggatagaccattgttca
ttgtccaattgtaaagatggattaattgatgtagttatggggtcaacggggataacgata
tcaaataatcatttttcacatcataatgaggtaatgttattgggacatagtgatgattat
ttgccagattcaggtatgcaagtcacaatatcatttaatcattttggtaaaaaattaatt
caaagaatgccaaggtgtagaagaggatatattcatgttgtcaataatgattttacaaga
tgggaaatgtatgcaattggtggaagtggaaatcctactatcaacagtcaaggaaataga
tatattgcaccctttgacccttttgctaaagaggtaacaaaaagagtggacacagatgaa
ggaaaatggagaaattggaattggagaagtgaaggggatgtaatggcaaatggagcatac
tttgtggcctctggtgaagaagttgaagttaaatatgaaaaagcttatagtgtggagccc
aaatctgctgattttattgaccaaattactttaaatgctggtgttcttattcacagggga
agtaacagtggaaaatggactgctgccaccaacaatgacaccgaatccgccggagacgac
ggtggaggggaagatctcgtggcgatttccggcgactccgacgacgattatggtggtgat
gaagagtctagaagctctacaatttactctaatttctccttgttatttaattttctaatg
acattgttagccttattgtag
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