Solanum tuberosum (potato): 102591010
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Entry
102591010 CDS
T02981
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03440
Homologous recombination
sot03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102591010
03460 Fanconi anemia pathway
102591010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sot04121
]
102591010
03036 Chromosome and associated proteins [BR:
sot03036
]
102591010
03400 DNA repair and recombination proteins [BR:
sot03400
]
102591010
Ubiquitin system [BR:
sot04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
102591010
Chromosome and associated proteins [BR:
sot03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
102591010
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
102591010
FA (Fanconi anemia) pathway
Downstream FA components
102591010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
102591010
NCBI-ProteinID:
XP_006350160
LinkDB
All DBs
Position
Un
AA seq
1126 aa
AA seq
DB search
MSTWQLYSVSVSDFRWKVSDGESLTEALEEPSLTLPPQQLQSMPDLLRQGSSRLAGNTDS
TSTQFPIFRTGSGKPVSVKHSSISTALSILGDEDKPILDTGIGTGRQDVLAFQEAVFQKG
SGKALNAPQSFSPSSLNKQFSMSNSLFQTGSGKPVNISSTGLNRAKALLGLDENGDHETF
PGSGKKNTTSDELFGFQGIASTGSTNVSAASLSPFDVKFNSPVCPAEELVADFLHCADKP
PPIKFHTAGGRSITVSCEALKRARSLLGDLELGCLVDEKDVADPLLSFSKDQKSVDQVST
KELNSDTPVSLLSAAKGSGSSSPFTSPLRSTLYHKKSSIKTENLVPASNLIKEFDAVAKE
STSRLDHSIPQNGEPFNKNSAATDLRENDIASKPKLLERPSRGPLVDISNSIGGGFADRN
QNVGRKRKPGGSFVSPFKKPRSTSIVNPLKRNNPGAANGFSDLAPKLTSQKGKVSVRYPF
HVARLYMKEYLGKPPSILSKLESLPDDVRRMNPATAETYVFNDKSCSGCIGVESFLEMLS
QSGASMQYVSKKWITNHYKWIVWKLASYERCYSGKFSGKLLTICNVLEELKYRYEREVNR
GHRSAVKRILEGDVPPSSMMVLCVSNIYSICVSPVGPQSSLSSTTENGTCAKVELTDGWY
SIIAVLDIQLSKKLAAGKLFVGQKLRIWGAGLCGWTGPVSPLEVSGMTSLLLHINGTYRA
HWASRLGFCKGGGIPLSFMSIKDGGGAVPLTLVVISRIYPVLFRQRLSNRGFIVRSERME
AKEMQYFNERRSSIVEGVVSESQREKRDAYIGSDYESKEGARILTILERAAEPELLMAEM
TSEQLNLFSSYQAKLEAFRQSDLQKSLEKALQTAGLAERDVTPFMRVRVVGLTSKRTPLK
CCPKEGLITIWNPTEKQHCGLAEGQAFSVTGLTPISSDSSTLYLQTKGSTSKWLPLSPLA
VEHFESSFCPRQSISLSKLGEVPISREFDIAAVVVFVGQLYTEAHQTKQWVFVADGSKAM
LDSDDELETLMAISFTSPCIGTDSFAPMNSNLVESTVCFCNVIKRARDNVNNLWVAEATE
NSTYYLNYDHSDCSHLKDAGASAERWAKIFGLRLEKLRGRVLSIIS
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggcagttgtactccgtctcggtgagtgatttccgatggaaagtctctgat
ggagagtctcttactgaagccctcgaagaacctagcttaaccctacctccccagcagctc
caatccatgcccgatctcttgcgtcaaggaagttcgagattagcagggaacactgattca
acttctacacaatttccaatttttcgaactggatcagggaaacctgtgtcagtgaaacat
tcttccatatcaacagctctttccatccttggtgatgaagacaagccgattttggacaca
ggcataggaactggaagacaagatgttcttgcttttcaggaagccgtgttccagaaaggc
tcagggaaagcccttaatgctccacaatccttttccccttctagcttgaacaaacaattt
agcatgtccaactcgttgttccagacaggctctggtaaaccagtcaatatatcttctaca
ggtcttaatagggccaaggcgttgttgggcttggatgaaaatggtgaccatgaaacattt
ccaggttctggaaagaaaaatacaacttcagatgagctctttggttttcagggcattgct
agcacagggtctactaatgtttcagcagcttcattgtctccgtttgatgttaaatttaac
tccccagtttgtccagcagaggagttagtagcagattttctgcactgtgcagataaacct
cctccaataaagtttcatactgctggtggtagatcaataacagtttcctgtgaggcattg
aaacgcgcaaggagtctgcttggagatctagagctgggttgtcttgttgatgaaaaggat
gtggctgatccattgctttctttttcaaaagaccaaaaatctgttgatcaggtctccacc
aaagaattgaactctgatactcctgtttccctcttatcggcagcgaaaggtagtgggtcc
tcaagcccttttacatcgccattgagatcaactttgtatcataagaagtcttcgattaaa
acagaaaatctcgttccagcaagtaacttgataaaggaatttgatgctgtggcaaaagaa
agcactagtaggctggaccatagtattccacagaatggagagccatttaataagaactca
gcagctacggaccttagagaaaatgacatcgcttcaaaacctaaattgctagaacggcct
tccaggggccctttggtggatatctcaaatagtattggaggaggatttgcagatagaaac
cagaacgttggtcggaagaggaaacccgggggaagttttgtttctccattcaagaagcct
cgaagcaccagcatcgtcaaccctctcaaaagaaacaatcccggtgctgctaatgggttc
tcagatttagcaccaaaattaacctctcaaaaaggaaaggtttcagttcgatatccattc
catgtggcacgattgtatatgaaggagtatcttggaaagcccccatcaatcctgagcaag
ctagagagtttgccagatgacgtgagaaggatgaatccagctactgctgagacttatgtg
ttcaatgataaatcttgctcaggttgcattggagtagagtcttttttggagatgctgtct
caatcaggagcttccatgcaatatgtttctaaaaagtggattacaaatcactataagtgg
attgtttggaaacttgcatcttatgagaggtgttacagtggcaaattttctgggaaactt
ctgacaatatgcaatgtacttgaagaattaaaatacagatatgaaagagaagtaaatcgt
ggtcatcgatctgcagttaagagaattttagaaggagacgtcccaccttcttctatgatg
gtactctgtgtttccaatatctattcaatttgtgtctcgccagttggacctcaatcttca
ctatcaagcacgaccgagaatggaacttgtgcaaaagttgaactgaccgatgggtggtat
tcaataattgctgtcttagatatacaactatccaagaagttggctgctggaaagctgttt
gttggtcaaaagcttaggatctggggagctggattgtgtggctggacaggtcctgtttca
cctcttgaggtgtcagggatgactagtttactgctgcatataaatgggacatatagagct
cattgggcatctcgtttgggcttctgtaaaggtggtggtattccattatcatttatgtca
atcaaggatggtggaggtgctgttccactaacattggttgtaatttcaaggatatatcct
gttctcttcaggcaaaggttaagtaatcgggggttcattgtaagatctgaacggatggaa
gctaaagagatgcagtattttaatgaaagacgtagtagcattgttgagggagtagtctca
gaatctcaaagagaaaagagagatgcatacattggaagcgactatgaaagtaaagaaggg
gcaaggattttaacgatactcgagagagctgcagaaccagaacttctgatggcagagatg
acttcagagcagttgaatttattttcatcctatcaagcgaagttggaggcattcaggcag
tctgacctgcaaaaatctcttgaaaaagctttgcaaactgctggacttgctgaaagagat
gtcactccgtttatgcgagttagagttgttggattgactagcaaacgtacaccattgaag
tgctgtccaaaggaaggcttaattacaatatggaatcctactgagaaacagcactgtggg
cttgcagagggtcaagctttttctgttacagggcttacaccgataagctcagactctagc
accctttacttgcaaacgaaagggtccacatccaaatggctgcctttgtctcctctggca
gttgaacattttgagagctctttctgtcctcgccaatcaatttcattgagtaaattgggt
gaagttcctatttccagggagtttgatatcgctgcggtggttgtttttgtggggcagttg
tatacagaagctcatcaaacaaagcagtgggtatttgtggctgatggatccaaagctatg
ttggattctgatgacgaattagaaaccttgatggccatcagtttcacctcaccatgcata
ggaactgattcatttgctccaatgaactccaaccttgtagaatctacggtttgtttttgc
aatgtcatcaagagagcaagagataatgttaataacctctgggtagctgaagcaactgaa
aattcaacgtattatttaaattatgatcattcagattgttctcatctaaaagacgcgggt
gcttctgctgaaagatgggcaaagatatttggcttgagacttgaaaagcttaggggaaga
gttctatctataattagctga
DBGET
integrated database retrieval system
