Solanum tuberosum (potato): 102591019
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Entry
102591019 CDS
T02981
Name
(RefSeq) recQ-mediated genome instability protein 1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
102591019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sot03400
]
102591019
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
102591019
FA (Fanconi anemia) pathway
102591019
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
DUF538
Motif
Other DBs
NCBI-GeneID:
102591019
NCBI-ProteinID:
XP_006351968
UniProt:
M1B394
LinkDB
All DBs
Position
Un
AA seq
642 aa
AA seq
DB search
MSRRRHQIICSSDEEEDGDDEPQQLAGGNEENENPNNIEMEILESSTNFESVTLNSPIQN
PTPNHEPNIDVSEVIRAADCGIGRVLEGLGLRLRREWLESCVGGLEGSVVGGFSGLDDTT
KAKLCFEQFLYSDMNFCGAGLLPRDVHKLHLVDLKGPFVLQVDEIVNISCPLQDRYQKAA
AGIKRCLKLSMTDGIQQVFGMEYRPIKDLDVLAPSGLKVAICNVHVRHGILMLVPEVIEV
LGGMVEELEEARKRLVNEINKPPRGKRTRSGVVPPLATRATGAAWPREGVTVPEHSDTSS
RQSMHFQVHERGTSGIATSATEEIHPITSGLPSSTTFTTPVYRREAQSNFPSTPAVSVPF
NRKVTGPTFSSDAASHAEDIHMADMTTEGIDVPIRREHNDPVLSSSYSMEVEELLSDVRS
DPATPASSRSRGSVRVSGGSVHNEDVTPDTMSTAAIDIDEIDLVDELDHPYILSGGKENP
FTYLASLSAKQAGMNGSASTVTGKIKCFLTGVKGFQYKQSSKYELRVYVDDGSLISEILI
DHALVQKKIGFSPAEVNAALSSSDSKRVSDTKETLKCFQKFLINFEGTMLVHLNEESPIP
VATEMNQGCSASDAWLLLKRLKPSTSPRQHHLHHPETINLSP
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaagacgccaccaaatcatctgttcctccgacgaagaagaggacggcgacgac
gaacctcagcaactcgccggcggcaatgaagaaaatgaaaatcctaacaacatagaaatg
gaaattctagaatcgtctactaacttcgaatcagtaaccctaaattctcccatccaaaac
cctacacctaatcatgagccaaacatcgacgtttctgaagttatacgagctgcggattgt
ggtattggtcgggtattggaaggattagggttaagattgcggagggaatggttagaatca
tgtgttggaggacttgaaggatcagtagtaggagggttttctggattggatgatacgacg
aaggcaaaactttgtttcgagcagtttttgtactcggatatgaatttttgtggtgcagga
ttgcttccaagggacgtgcacaagctgcatttggttgatcttaaaggaccctttgttctt
caggtagatgaaattgtgaatatcagttgtcctcttcaagataggtatcagaaagcagct
gctggaataaagaggtgtctgaaattgtccatgactgatggcattcagcaagtgtttggg
atggagtacaggcctataaaagatctcgatgttctggctccttctggactgaaggttgct
atctgtaatgttcatgttaggcatggaattctgatgttggtccctgaagttattgaagtt
ctgggtgggatggtggaagagttagaagaagcaaggaagcggctagttaatgaaataaat
aagccaccaagggggaaaagaacaaggtctggagtggttcctcctttggcaactagagct
actggtgctgcatggccacgagaaggtgttactgttccagagcactctgatacttcctca
agacaaagtatgcattttcaggttcatgaacgaggaacatctggtattgctacttctgca
actgaagaaattcatcccattacatctgggctaccatcttctacgacattcaccactcct
gtttatagaagagaggctcaatctaattttccatctactccagctgtttctgtcccattc
aataggaaggttactgggcctaccttttcgtctgatgcagctagtcatgcagaggatatc
catatggctgacatgaccaccgaaggcattgatgttccaattagaagggaacataatgac
cctgttctgtcatcttcttactccatggaagtggaggaacttctgtcagatgttagaagt
gaccctgccacacctgccagtagcaggagcagaggaagcgtccgtgtctctggcggtagt
gtccataatgaagatgtaacaccagatacaatgtctactgcagcaattgacattgatgaa
attgatttggttgatgaattggaccatccatatatactttctggagggaaggaaaaccct
ttcacttacttagctagtctgtcagctaagcaggctggtatgaatggcagtgcttccact
gttacaggaaaaattaagtgctttcttactggtgtgaagggctttcagtataaacagagt
agtaaatacgagcttcgagtttatgttgatgatggcagcctaatctctgagatccttata
gatcatgctcttgtgcagaaaaaaataggcttttctcctgcagaggtaaatgctgctctt
agttcttcagatagcaaacgagtcagtgacacgaaggagacactgaaatgtttccagaaa
ttcttgattaattttgagggaacaatgcttgttcatttgaatgaagaatctccaattcca
gttgctactgaaatgaaccaggggtgttctgcctctgatgcatggttgcttctcaaaaga
ctaaagccttctacttctccgcgacaacatcatcttcatcacccagaaaccatcaattta
tccccttga
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