Solanum tuberosum (potato): 102591025
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Entry
102591025 CDS
T02981
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot00040
Pentose and glucuronate interconversions
sot01100
Metabolic pathways
Module
sot_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102591025
Enzymes [BR:
sot01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
102591025
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Beta_helix
Motif
Other DBs
NCBI-GeneID:
102591025
NCBI-ProteinID:
XP_006353136
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All DBs
Position
Un
AA seq
396 aa
AA seq
DB search
MLITKKHVSLLLLLLVIMFFFHLSSGTKITYNVQSYGAKPDGKTDSTKAFLNAWAAACAS
TKSVMIYVPQGRYLLASAAFWGQNCKNKDTTIKIDGTLVAPSDYTVIGNTGNWLKFERVN
GLTISGGTFDGQGAALWTCKTSGKSCPNGATTLAFYNSNSIVISGLTSLNSQMFHMVIDG
CQNAKLQNMKISASANSPNTDGIHIAASTGVTILKTVIGTGDDCISIGPGTSNLWIENVS
CGPGHGISIGSLGWSMQEAGVQNVTVKTTTFRGTQNGLRIKTWARPSNGFVKGVLFQHSV
MVNARYPILIDQEYCPDQKNCPGQVSGVKISDVTYQDIHGTSTSQVALKLACSKANPCQG
IRLEDVNLTFKNQQAQALCSNAAGTSYGVNKPESCL
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgctaatcaccaagaaacatgtgtctcttcttcttcttcttctagttatcatgtttttc
ttccatttatcatcggggacgaagattacatacaatgtgcagagttacggagccaaacct
gatggaaaaacggattcaacgaaagcatttctgaatgcatgggctgcagcttgtgcttcc
acaaagtccgtcatgatatatgtaccacaaggaaggtatttactagcaagtgctgcattt
tggggacaaaattgcaagaataaagatactacaataaagattgatggtaccttagtagct
ccctctgattatacagttataggtaatactggaaattggctaaagtttgagagagttaat
ggacttacaatttctggtggaacttttgatggtcaaggtgctgctctttggacttgtaaa
acctctggcaaaagttgtcctaatggtgcaacgacacttgcgttttacaattcaaacagc
atagtgataagtggattgacttcattaaacagccagatgtttcatatggttattgatgga
tgccaaaatgctaagctgcagaacatgaaaatttcagcctcagctaacagcccaaacaca
gatgggattcatatagcagcttctactggtgtcaccattttgaaaacagtaattggtacc
ggcgatgattgtatatcaataggccctggaacctccaacttgtggattgaaaatgtctct
tgtggccctggtcatggcataagcattggaagtctggggtggagtatgcaagaagcaggg
gttcaaaatgttacagtgaagacgactacgtttagaggtactcaaaatggattgagaata
aagacatgggcaaggcctagtaatggatttgtgaagggtgttctgtttcaacattccgtg
atggtgaacgccagatatcccatcttaattgatcaagaatattgccctgatcagaagaat
tgccctggccaggtatcaggtgttaagataagcgatgtaacatatcaagacattcatgga
acatcgacatctcaagttgcacttaaacttgcttgtagtaaggctaatccctgccaaggg
attagactggaagatgtaaatctaacctttaaaaatcaacaagcacaagcgttatgctcc
aatgctgctggaacttcctatggtgtaaataaaccagaaagttgtttgtaa
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