Solanum tuberosum (potato): 102592094
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Entry
102592094 CDS
T02981
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
102592094
Enzymes [BR:
sot01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
102592094
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
RhgB_N
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
102592094
NCBI-ProteinID:
XP_015159495
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All DBs
Position
Un
AA seq
619 aa
AA seq
DB search
MASSILRITLSIPHGDVTGISYGGVQNLLSTHNLETNRGYWDIIWNNTGPRTTRAKLSGT
SFEVIINNENQTEISFKKTWNASQSNEPPLNIDKRFIMLRNTPGFYTYSIVERLKGWPIS
YIQNLRLVFKLQGNMFHYMAVSDERQRVMPTEMDRKEGQVLDYKEAVLLTNSTNLDLNGE
VDDKYFYASDNKDGKVYGWVSSTNPPLGFWMINPSNEYRTGGPFRQDLTTHVGPTVLSIF
VSTHYAGEDLAIKFGQGEPWKKVIGPVFVYLNSNAAAKANPSILWNDAKKRVCIDFKAAS
WPYEFAVSKDYIKSNQRGSVSGKLFVNDRFISKHIVAASNAYIGLAPLGEAGSWQRENKG
YQFWTKTHGNGNFIIEKVIFGTYNLYATVPGILGDYKYTSIINVTSGSNIKLGVLLYNPP
RNGATIWEIGVPDRTAAEFFIPNPPPQFKVHKYKNNSESRFKQYGLWKQYSVLYPKIDLV
YNVETSKYSRDWFYAHVTRKIGNNTYKSTSWKIIFNLANVSNASNYTLQLALAAASQAEL
QVRVNDEKAQMPHFTTGHIGGSNAIARHGIHGLYWIYSIGIQGKLLINGENTIFLTQILA
LSPFQGIMYDYLRLEGPHQ
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttcaatactccgtataactttatcaataccacatggtgatgtcactggtata
tcatatggtggggtccaaaatctactatccacccacaatttagaaaccaatagagggtat
tgggatattatttggaataacactggacctcgtacaactagagcaaagctttcaggaaca
agttttgaggtgataattaataatgaaaatcagacagaaatttcatttaaaaaaacatgg
aatgcttctcaatcaaatgaacctcccttgaacattgataaaaggtttataatgctacgc
aacactcctggattttatacgtattcgatcgttgaacgtttaaaaggatggccaatttcg
tatatacaaaatctcaggcttgtgttcaagcttcaaggaaacatgtttcattatatggct
gtttctgatgagaggcaacgtgtcatgccaacagaaatggatcgaaaggaaggccaagtg
cttgactataaagaagctgttcttctcactaattcgactaatttagatttaaatggagag
gtggatgacaagtatttctatgcaagtgataataaagatggtaaagtttatggatgggtt
agttctactaatccaccattaggattttggatgattaatccaagtaatgaatatcgtact
ggaggaccttttagacaagaccttactacacatgttggtccaactgtacttagtatattt
gtgagtacacattatgctggagaggatttagcaattaaatttggacaaggagaaccatgg
aaaaaagttattggtcctgtttttgtgtatctaaattcaaatgctgcagctaaggcaaat
ccttctatactttggaatgatgcaaagaaaagagtatgtattgatttcaaagctgcaagt
tggccttatgaatttgcagtttcaaaagactacatcaaatctaatcaaagaggatctgtt
agtggcaaactatttgttaatgacaggtttatcagtaaacatattgtggcagcatccaat
gcttatataggattagcaccactaggagaagctggatcttggcaaagggaaaacaaaggt
tatcaattttggacaaaaacccacggtaatggaaacttcatcatagaaaaggtcatattt
ggtacatataacttgtatgcaacagtcccaggaattctcggagattacaaatacacctca
attataaatgttacttcaggttcaaatattaaactaggtgttttgttgtataatcctcca
agaaatggagctacaatttgggaaattggtgtaccagatagaactgctgctgaatttttt
attccaaatccacctccacaattcaaagttcacaaatacaaaaataattctgaatcaaga
tttaaacaatatggtttgtggaaacaatatagtgttttgtatcctaaaattgatcttgtc
tacaatgttgagactagcaaatattcgagagattggttttatgctcatgttactaggaaa
ataggaaacaacacatataaatctacttcatggaaaattatatttaatcttgccaatgtt
agtaatgcctcaaattacactctacaattggctcttgctgcagcttcacaagctgaactt
caagttcgtgtcaacgatgaaaaagcgcaaatgcctcattttacaacaggacatataggg
ggaagtaatgcgattgcaagacatggaattcatggattatattggatttatagcattgga
atacaaggcaaattgctgatcaatggagaaaacacaatttttcttacacaaatactggct
cttagcccatttcaaggtataatgtatgattatcttcgtttggaaggacctcatcagtaa
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