Solanum tuberosum (potato): 102592136
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Entry
102592136 CDS
T02981
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102592136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102592136
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102592136
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
SET1_RBD
Motif
Other DBs
NCBI-GeneID:
102592136
NCBI-ProteinID:
XP_006352343
LinkDB
All DBs
Position
Un
AA seq
465 aa
AA seq
DB search
MEMEPGKLFVGGISWDTNEDRLKEYFQAFGDVIEAVIMKDRITGRARGFGFVVFADPSVA
ERVVKEKHIIDGRTVEAKKAVPRDDQHITRNNGSMQGSPGPARTKKIFVGGLASSVTESD
FKNYFDQFGTITDVVVMYDHNTQRPRGFGFITFDSEEAVDKVLYKTFHELNGKLVEVKRA
VPKELSPSPARSPFNGQNYGLNRVNNLLNAYTQGYVPSSIGNYGMRMEGRYSPLTAGRNG
YSSFNPADFNLPTGIDSTLNLNYGGNGTFGSNYGRGFNSLYNGNSNRFSGPVGFAPGRVA
SSSMLNSVGWNLWDNESLNYGTNSANSTDFVGSGSGAAGYGTLGGLGTIWGSSSISGQGG
GNGSFGSGNIANSGEAVGTGYGRNSGSNAVNTSPYSSAKDIPAGAFGNLYGNTVGASFYE
DSAWRSASPELDDSASFGYGLGNAESLGYVGGYSVANRSNKGIAA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggagcctggaaaattgtttgttggtggaatttcttgggacactaatgaagat
cgtctcaaagaatatttccaagcttttggtgatgtgattgaagctgtgatcatgaaagat
cggatcactggtcgtgctcgtggttttggttttgttgtttttgcagacccttctgttgcc
gaaagagttgtgaaggaaaaacacataattgatggtagaactgtagaggcaaagaaggct
gttccgagagatgatcaacacattaccagaaacaatggtagtatgcagggttctccaggt
ccagctcgcactaaaaagatttttgttggaggtttggcatcctcagtcaccgagagtgac
ttcaagaattactttgatcaatttgggacaatcacagatgttgtagtgatgtatgatcac
aacacacaaaggcctagaggatttggatttatcacttttgactcagaagaggcagttgat
aaagttctatacaaaacatttcatgaacttaacggtaaattggttgaggttaagcgtgca
gtacccaaagagctgtcacctagtccagcccgaagcccatttaatggacagaactatggt
cttaacagggttaacaatttgcttaatgcatatacccaaggttacgttccaagctcgatt
ggaaattacggaatgagaatggaaggtagatacagtcctcttactgctggtcgaaatgga
tattcatcctttaatcctgctgactttaacttaccaacaggcatagactccacattgaac
ctaaactatggtggaaatggaacttttggttctaattatggacgtggattcaattcctta
tacaatgggaattcaaacaggttcagtggtcctgtcgggtttgcccctggaagggttgca
agcagttcaatgttgaattcagtaggatggaacctgtgggacaatgagagtcttaattat
ggaacaaattctgccaactctactgattttgttggttctggaagtggggctgcgggatac
ggtacgttggggggtctcggaacaatctggggttcctcttcaatttcgggtcaaggtgga
ggaaatggttcttttggaagtggcaacattgctaacagtggcgaagcagttgggacaggg
tatggacgaaactcaggaagcaatgctgtcaatacatcaccttattcctcagcaaaagac
attcctgctggagcttttgggaacttgtatggtaatactgtaggtgcttcgttctatgag
gactcagcctggcgttcagcatctccagaactagatgactctgcatcctttggttatgga
cttgggaacgcagagtcacttggttatgttggtggctatagtgttgcaaatagatcaaat
aaaggaattgctgcctag
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