Solanum tuberosum (potato): 102592142
Help
Entry
102592142 CDS
T02981
Name
(RefSeq) ABC transporter B family member 28
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
sot
Solanum tuberosum (potato)
Pathway
sot02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102592142
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sot02000
]
102592142
Transporters [BR:
sot02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
102592142
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
ABC_ATPase
AAA_30
AAA_16
AAA_5
AAA_29
RsgA_GTPase
Zeta_toxin
AAA_25
AAA_28
AAA_33
Rad17
AAA_15
DUF4284
Motif
Other DBs
NCBI-GeneID:
102592142
NCBI-ProteinID:
XP_006353380
LinkDB
All DBs
Position
Un
AA seq
717 aa
AA seq
DB search
MATVPNTLCLPLTPFPIQRRRNHRLLLHRSNGPPQFPISTAQPFRPQFVNCRKLKRSVIS
SAYITGPAFDAFVSENDPKFEESDDSLVAVQPIEVIRWGFIWKLVSRHKLKLLASVFSLV
VCTTCSLSLPLLSGRFFEVLIGTRTDPLLELLSKVGLLYTLEPIFTIIYVANITSIWEKV
MSSLRAQIFRRVLIQKIEFFDHYKVGELTALLTSDLGSLKNIVSENTSRDRGFRALSEVV
GTLSLLFALSPQLAPILGLLILAVSILVALFKRSTVNVFQAHGLVQASIADSVTESFSAI
RTVRSFSGEKRQMSVFASQVLEFESSSIKIGTFKSFHESVTRVAIYISLMALYCLGGSKV
KAGELSVGIMASFIGYTFTLTFAVQGLVNTFGDLRAALAATERINSVLSDAEIDEALACS
LEKDMKQKKVHDETLELYLVNDSDEKKQSTKTRYMSTLKFGSSVRNLAETGDICLEDVDF
SYPVRPDVEILCGLNLTLKCGTVTALVGPSGAGKSTVVQLLARFYEPTRGRITVAGEDLR
TFDKSEWARVVSLVNQEPVLFSVSVGENIAYALPDEYVSKDDVVKAAKAANAHEFIISMP
QGYDTLVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDTISERLVQEALDHLM
KGRTTLVIAHRLSTVQNADQIALCSDGKIAELGTHLELLERKGQYASLVDTQRLAFE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggctactgtacccaacaccctctgtctccccctcacccccttccctatacaacgccgg
cgcaaccaccggctgctactccaccgttccaatggacctcctcagttccccatctcaaca
gcacaaccatttcgtccacaatttgttaattgccggaaactgaagcggtccgtcatatct
tcggcttatattacaggccctgcttttgatgcttttgtttcagaaaacgaccctaaattt
gaagaatcagatgatagtttagtcgcggttcagccaattgaagttatccgttggggcttt
atatggaaacttgtttctcggcacaagttgaagctccttgcttctgttttctctcttgtc
gtctgcaccacttgttctctttccctgcctttactttccggaagattttttgaggtactt
attggaacaagaacagatcctctgttggaactgctcagtaaagtgggacttctatataca
ctggagccaatttttacaattatctatgtggcgaacataacttccatttgggagaaggtt
atgtccagcttaagggctcaaatttttcggagagtactgattcaaaagattgaatttttt
gaccattacaaggttggtgaattaacagctctattaacatctgatctgggttctctcaaa
aatattgtcagtgagaatacttcgcgggatcgtggttttagggcactatcagaggtggtg
ggaacattatccttattgtttgctctatctccccaacttgcaccaattctgggcttgctc
atccttgcagtgtctattttagtcgctctgttcaagaggtcaactgtaaatgtcttccaa
gctcatggactggtccaagcatcaatagctgattctgtgactgaatcattttctgccatt
cgcactgtgaggtcatttagtggggagaagcgtcagatgtcagtatttgctagccaggta
cttgagtttgagagtagtagcataaagattggaaccttcaaatccttccatgagtcagtg
acgagagtggcaatttatatctccttgatggctttatattgccttggtggaagcaaagta
aaggcaggtgaattatcagtgggaattatggcttcatttatcggatatacatttacatta
actttcgcagttcaaggcctcgtaaatacctttggagaccttcgtgcagctcttgcagca
actgagagaattaactcagttttatccgatgctgaaattgatgaagcgcttgcatgttct
ttagagaaagacatgaagcaaaagaaggtccatgatgagactttagaattatacttggtg
aatgattctgatgagaagaagcaatctaccaaaacaagatacatgtctacactaaaattt
ggtagcagtgtgcgaaacctggcggagactggtgatatctgtcttgaagatgtggatttc
tcgtatccagtgaggcctgatgtggaaatcctttgtggtcttaatttaaccctaaaatgt
ggaactgttacagctctggtgggaccaagtggtgcagggaaaagtacagtggtacagcta
ttggcacgtttctatgagccaactcgaggtcgcataacagttgcaggagaagatttgcga
acatttgataagagcgagtgggcgcgggttgtctctctagtcaatcaagaacctgttctt
ttctctgtatcggttggagaaaatattgcttatgctctccctgatgaatatgtatccaag
gatgacgtggtaaaggcagccaaggctgccaatgcgcacgagttcataatttcaatgcca
cagggttatgacacattggttggtgaacgtggtggtttattgagtggtggacagaggcag
cgaattgctattgctagggctctactgaagaatgcccctattttgattcttgatgaggcc
actagtgctttagacactataagtgagcgtctagttcaagaagccctggaccatctgatg
aagggacgaacaactttggttattgctcacagattgagcacagttcagaatgcagatcaa
attgctttgtgttctgatgggaagattgcggagttgggaacacacttagagttgttggaa
aggaagggtcaatatgcttctctggttgatactcagaggctcgcatttgaataa
DBGET
integrated database retrieval system
