Solanum tuberosum (potato): 102592487
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Entry
102592487 CDS
T02981
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102592487
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sot01002
]
102592487
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sot04121
]
102592487
03036 Chromosome and associated proteins [BR:
sot03036
]
102592487
03400 DNA repair and recombination proteins [BR:
sot03400
]
102592487
Peptidases and inhibitors [BR:
sot01002
]
Metallo peptidases
Family M67
102592487
Ubiquitin system [BR:
sot04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
102592487
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
102592487
BRISC complex
102592487
Chromosome and associated proteins [BR:
sot03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
102592487
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
102592487
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
102592487
NCBI-ProteinID:
XP_006356198
LinkDB
All DBs
Position
Un
AA seq
420 aa
AA seq
DB search
MALTSVKMTEEVWLTCLSHALSTETEEIMGLLLGDTQQSKNGSVTALIWGALPQPRCDRR
KDRVETNPEQLTAASVKAERMTLATGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD
AGFIGLIFSCFSEDAQKVGRIQVIAFQSLDGKQQNHMLLRPISLSPVHKNSVIDLESPLS
SADTSRAGSKIEILEQDTGDSRASALASKGGTRSTDLGNFFANVDNRVGENLHANSLSNA
VIDVDPMDMSESMQEAMHRSNLEMSGAEYVRKEIPLLVLPSSSLFNLDAPLNSFTDLQRV
LFEEERTAYNQAVVTNMRETKVHPLTFIHHTSTYQASMCKLMEYCLSPAISSLQDQLREN
EIRLKMLSEEAKVLEAETIRGEPNTSSPRRGSASLGQRDLYSPTELRSVSGSSSRSRKAP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggctctaacgagtgtgaaaatgacggaggaagtgtggttaacatgtctcagtcatgca
ttgtctacagaaacagaagagataatggggcttctcctcggtgatactcagcagtcaaaa
aatggtagtgtgactgcacttatatggggagcactgccacagccacgttgtgacaggagg
aaggatcgtgttgagaccaatcctgagcagctaactgctgcatcagtcaaggctgagaga
atgactctggcaacaggaagaacaacaagagtaattggctggtaccattcacatccccac
attacggtgctcccttcccatgttgatgtccgcactcaagccatgtatcaacttctggat
gctgggtttattggattgatattttcgtgttttagtgaagatgcacagaaggtcgggaga
atccaagttattgcatttcagtccttggatggaaagcagcagaatcacatgttgttgagg
cctatttccctttcccctgtacataaaaattctgtaatagaccttgaatcgcctttaagt
tccgcagacacatctagagctggttcaaaaattgagattcttgaacaagatactggtgat
tcaagagcttctgctttagcttctaagggtgggacaagatccacggacttgggcaatttc
tttgctaatgttgataatagagttggagaaaaccttcacgccaacagtcttagtaatgca
gtcattgatgtagatccaatggacatgtcagaaagtatgcaagaagcaatgcatcgatcg
aatctggagatgagtggtgcagaatatgtcagaaaggaaatccctcttcttgttctgcca
tcctcatctcttttcaatcttgatgcacctttgaactcattcacggatctgcaacgggta
ttatttgaagaagaacgaactgcatataatcaggctgttgtaacaaatatgagggaaaca
aaagtgcacccgctcactttcattcatcacacatctacatatcaggcttctatgtgcaaa
ttaatggagtattgcttaagtcccgccatcagttccctccaggaccagttgagagagaat
gaaattcggctaaagatgctaagtgaagaagccaaagttttggaagctgagactataaga
ggggaaccaaatacaagttctcctcgtcgaggtagtgcttcattgggtcaaagagacttg
tacagtccaaccgagttaagaagtgtttccggttcaagtagtcggagcagaaaagcaccc
taa
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