Solanum tuberosum (potato): 102592899
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Entry
102592899 CDS
T02981
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03020
RNA polymerase
sot03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102592899
09124 Replication and repair
03420 Nucleotide excision repair
102592899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sot03021
]
102592899
03400 DNA repair and recombination proteins [BR:
sot03400
]
102592899
Enzymes [BR:
sot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102592899
Transcription machinery [BR:
sot03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
102592899
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
102592899
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
PRISE
Motif
Other DBs
NCBI-GeneID:
102592899
NCBI-ProteinID:
XP_006347043
UniProt:
M1CWR0
LinkDB
All DBs
Position
Un
AA seq
1191 aa
AA seq
DB search
MDLEDEYEPQYNVDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
SADIEIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLT
YSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG
ECPLDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPST
MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQ
MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEY
CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR
GYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS
TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA
AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVN
TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLV
AKGYIEYIDTEEEETTMISMTINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPF
PDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLP
AGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPD
RATTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTS
LRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP
WTVEGISPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALH
KCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAE
GRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFE
CRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKLAKDQKKKAA
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atggatttggaggatgaatatgaaccacagtacaatgttgatgatgatgaagaggagata
acccaagaggatgcttgggctgtgattagtgcttactttgaggagaagggtcttgttcgt
caacaactagattcgtttgatgagtttattcagaacacgatgcaagaaattgttgatgaa
tctgctgatatagagatccgacctgagtcccagcataaccctggtcaccaatctgacttt
gctgagactatctataaaatcaattttggtcagatttatttgagtaagccaatgatgaca
gagtcagatggtgaaactgctaccctatttccaaaggctgcaaggttgaggaatctgaca
tattctgctcctttgtatgtggatgtcacgaaacgagtcatcaagaaaggacatgatggt
gaagaagttactgaaactcaggacttcacaaaagtctttattggaaaggttcctataatg
ctgcggtcaagttactgcacattatatcaaaattctgagaaagatctaacagagcttgga
gaatgtccattagatcaaggcgggtattttattataaatggaagtgaaaaggtcttaatt
gctcaggagaagatgagcacgaaccatgtgtatgtctttaagaagaggcaacctaacaaa
tatgccttcgttgcggaagtcaggtcaatggcagaatctcaaaaccgcccgccaagtact
atgttcgtgaggatgctctcaaggactagcgcaaaagggggttcctcgggccaatacatt
cgagcgacacttccatatatccgtacagagattcctattatcatcgtgtttcgagctcta
ggttttgttgctgataaggatatattggaacatatctgttatgatttcaatgatactcaa
atgatggagttgttacgtccgtcgttggaagaagcttttgttattcaaaaccaacaggtt
gctcttgactacatcgggaaaagaggggctacagttggtgttacaagggaaaaaaggatt
aagtatgccaaagagattcttcagaaagaaatgcttcctcatgttggggttggagagtat
tgtgaaaccaagaaagcttattattttgggtatatcatccaccggcttttgttatgtgcg
cttggccgaagggctgaggatgatagggatcattatggaaataagagactggatcttgct
ggtcctttgcttggtgggctgtttcggatgctctttagaaagttgacaagggatgttaga
ggctatgtgcaaaagtgtgttgacaatggaaaagatgtaaatctccaatttgcaatcaaa
gctaagaccattaccagtgggctgaaatactctcttgctactggaaactgggggcaagct
aatgcagcgggtacaagggctggtgtttcgcaggtgctgaatcgtctgacttatgcctct
actttgtctcacttgcgacggttgaattcccctattggacgagaagggaaactggccaaa
ccaaggcaattgcataattcacagtggggaatgatgtgtcctgcagaaacaccagagggt
caagcatgtgggctggtgaagaatctagctttaatggtttatataacagttggttcagcg
gcatatccaattttggagtttttggaagagtggggtactgagaactttgaggaaatttct
cctgcagttattccacaggctacaaagatctttgtcaatggtacctgggtgggaattcat
cgtgatcctgacatgttggtgagaacattgagacgacttaggagacgggttgacgtcaat
actgaggttggggtggtccgtgatatccgtttgaaagaacttcgaatttataccgactat
ggcaggtgcagtcgtccattgtttattgtggaaaagcaaaggctgatgatcaagaagaag
gatattcaaacattgcaacaacgggaatcacctgacgagggtggctggcacgatttggtg
gctaagggatacattgagtatattgacactgaagaggaagagacaacgatgattagcatg
actataaatgatcttgtgcaagcacgccttaatcctggcgacgcttattctgatacctat
actcattgcgaaattcacccatcactaatattgggtgtctgtgcatcaattattccattt
cctgatcataatcagtctccccgtaatacttatcagtcagctatgggtaagcaagccatg
gggatttatgtcaccaactaccaatttcggatggacacattggcctatgtgctttattat
cctcagaagcctcttgtcacaacacgagccatggaacacttgcattttaggcaactacct
gcgggcatcaacgcaattgtcgccatctcctgctattctggatacaatcaagaggattct
gtcattatgaatcagtcatcgattgatcgtggatttttccgatctctgtttttccgttcg
tacagggacgaggagaaaaagatggggacattggtcaaggaggactttggacgtcctgat
agagctactactatgggtatgcgccatggttcgtacgataagttggatgacgatggtctt
gcccctccaggaactagagtttctggtgaggatgttatcattgggaagacaactcccatt
tctcaggatgatgcgcaagggcaagcctctcgctatacgaggaaagatcacagtaccagt
cttcgccatagtgaaactggaatggtggatcaggttctattaacaacaaatgctgacggg
ctcagatttgttaaagtgagggtcagatcagtccgtattcctcaaattggggacaagttt
agcagtagacatggtcagaagggaacagtcggcatgacatatacacaagaagatatgcca
tggaccgtggaaggcattagtcctgatattattgtgaatcctcatgctattccttctcga
atgactattggtcagctgattgaatgtattatggggaaggttgctgcacacatgggaaaa
gaaggtgatgccactccctttacagatgttactgttgataacatcagcaaagctctgcat
aaatgtggttaccagatgcgtggttttgagaccatgtacaatggtcatactgggcggcgg
cttagtgcaatgatattccttggtcccacgtactaccagcgcctgaagcatatggttgat
gacaagattcattctagaggcagaggccctgtgcaaatcctcacaaggcagcctgcggaa
ggtcggtcacgtgatggtggtcttcgttttggagagatggagcgagattgtatgattgct
cacggtgctgctcattttctcaaggagcggttatttgaccaaagcgatgcatacagagtt
catgtttgtgagcgttgtgggctgatagccattgccaacctcaagaagaattctttcgaa
tgcagaggttgcaagaacaaaactgatatcgtccaggttcacattccctatgcatgcaaa
ttgcttttccaggagctaatggctatggctatagctccaagaatgcttacaaaggatgtc
aagctagccaaagatcaaaagaagaaagcagcttga
DBGET
integrated database retrieval system
