Solanum tuberosum (potato): 102592958
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Entry
102592958 CDS
T02981
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102592958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sot03041
]
102592958
Spliceosome [BR:
sot03041
]
Common components
Common spliceosomal components
SR proteins
102592958
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_YTH1
Motif
Other DBs
NCBI-GeneID:
102592958
NCBI-ProteinID:
XP_006359376
UniProt:
M1AT81
LinkDB
All DBs
Position
Un
AA seq
315 aa
AA seq
DB search
MSRSSRTLYVGNLPGDVREREVEDLFHKYGPIAHIELKIPPRPPGYAFVEFEEARDAEDA
IRGRDGYDFDGHRLRVELAHGGRGNSSSNDRYGGGGGGGGGGGRGQRGGGVSRRSDFRVL
VTGLPHSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIIDYTNYDDMKYAIKKLDDSEFR
NAFSRATIRVKEYDRSRSRSRSRSRSRSYSKGKSVSRSRSRSRSRSRSKSKSKSPKVKSS
KRSRSRSRSVSSRSRSGSKGRPVSRSPSRSRSPAPARSKPLSKSPKRRTPSSSPKRRTPS
RSPSRSRSRSRSLSR
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagtcggtcgagtaggacactttatgttggcaatcttcctggtgatgttcgtgagcgt
gaagtggaagatctatttcacaagtatggcccgatagctcatattgagctgaaaattcca
ccaagaccacctggttatgcttttgttgagtttgaagaggctcgcgatgctgaagatgct
attcgtggtcgtgatggctatgattttgatgggcaccgtctgcgggttgagcttgcacat
ggcgggcgtggtaactcatcatcaaatgatcgttatggtggcggcggcggcggcggtggt
ggcggcggccgtggtcagcgtggtggaggagtgtccagacgttctgattttcgagtgtta
gttacaggattaccccattcagcatcgtggcaggatctcaaggatcacatgcgacgtgct
ggggatgtttgtttctcccaagttttccgtgatgggagtggcaccactggtataattgat
tatacaaactatgatgacatgaaatatgctatcaaaaagcttgatgactctgagtttcgg
aatgccttttctcgtgcgacaattcgagttaaggaatatgaccgcagtcgaagccgtagc
cgcagccgcagtcggagccgttcttactccaaaggaaagagtgttagtcgaagccgtagc
cgtagccgaagcagaagtcgtagcaagagcaaaagcaaatctcctaaagttaagtcttca
aagcgctcaagatctcgttcaaggtctgtgtcttctcggtctcgttctgggtcaaaagga
cgtcctgtctcaagatctccatcaaggtccagatcgccagcaccagctcgttcaaaaccg
ttgagcaaaagtcccaaaagacgcactcccagcagtagccccaaaagacgcactccaagc
agaagcccaagccggagtaggagccgtagccggagtttgtccaggtaa
DBGET
integrated database retrieval system
