Solanum tuberosum (potato): 102593350
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Entry
102593350 CDS
T02981
Name
(RefSeq) cyclic nucleotide-gated ion channel 4-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sot
Solanum tuberosum (potato)
Pathway
sot04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
102593350
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sot04040
]
102593350
Ion channels [BR:
sot04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
102593350
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
IQ_SCN5A_C
Separin_C
Motif
Other DBs
NCBI-GeneID:
102593350
NCBI-ProteinID:
XP_006367652
LinkDB
All DBs
Position
Un
AA seq
688 aa
AA seq
DB search
MASHHELELSNNYSDPSDDDMDEDEDEEEQDNIEDEEQEDDNSNDYNICSGRSRRGGLTD
FFSWKVIDPRAPWVQEWNRVFLLVCATGLFVDPLFFYALSISETCMCLFIDGWFAVTVTV
LRCMTDAMHLWNMWIQFKMHKLRPYDGKMDENLISSSSRGSRLHQDQSFRCFVALRYLKS
KKGFFFDLFVILPLPQIVMWVGIPGLLEKGYITTVMTVLLIMFLFQYLPKIYHSVCLLRR
MQNLSGYIFGTVWWGIALNLIAYFVASHAVGACWYLLGIQRAAKCLKQQCRVTNVCSLRM
LACEEQIFYGTSSLVKHKSRVIWGETKIARSTCLASEHNFGYGVYKWTVQLVTNENRFEK
ILFPIFWGLMTLSTFGNLESTTDWLEDVFIIIVLTTGLLLVTMLIGNIKVFLHATTSKKQ
AMQLKMRNVEWWMRRRRLPQGFKQRVRNYERHRFAATRGVDEYEMISNLPEGLRRDIKYH
LCLDLVRQVPLFQHMDNLVLENICDRVKSLIFTKGETITREGDPVQRMLFIVRGHLQSSQ
ELRDGVESCCMLGPGNFSGDELLSWCLRKPFVERLPPSSSSLVTLETTEAFGLEADDVKY
VTQHFRYTFVNEKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRPLSR
SSSLTEDRLRLYTALLTSPKPNQDDFDF
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggctagtcatcatgaacttgaactatcaaataattatagtgatccaagtgatgatgat
atggacgaggacgaggacgaggaagagcaagataacatagaagatgaggaacaagaagat
gataattctaatgactacaacatttgtagtggtcgtagtcgaagaggaggactaacagac
tttttctcgtggaaagtcatagaccctagagcgccttgggttcaagaatggaatagagta
tttttattagtatgcgccacggggctatttgtggatcctctctttttctacgccctttct
ataagcgagacttgcatgtgcctttttatcgacggttggttcgcggtaacggtcacggtt
cttcgatgcatgaccgatgcgatgcatttatggaacatgtggatacaattcaagatgcat
aaattacgtccttacgatggaaaaatggatgaaaatctaattagtagtagtagtcgaggt
tctcgactacatcaagaccaaagttttcgatgttttgtggccttacgatacttgaaatcc
aagaagggtttctttttcgatctctttgtcatccttcctttacctcagatagtaatgtgg
gtagggattccaggtttactggagaaaggatatataacaacagtgatgacagtattatta
ataatgtttctgtttcaatatctgcccaaaatttatcactcagtttgcctactaagacgc
atgcagaatctctctggatacatttttggtaccgtttggtggggaattgctcttaacttg
attgcttattttgttgcctctcacgcagtgggagcatgttggtacttgctaggaatccaa
agggcagcaaaatgtttgaaacaacagtgcagagttacaaatgtttgtagcctaagaatg
ttggcatgtgaagagcaaatattttatggaacaagtagtttggtgaagcataaaagtaga
gtcatatggggtgagaccaaaattgcaagatcaacatgtctagcctctgaacacaatttt
ggttatggagtttataaatggactgttcaacttgtcacaaatgagaatcgtttcgagaaa
atattatttcccatcttctggggtctcatgactctcagtacatttggcaatttggagagc
acaacagattggttggaggatgtattcataatcattgttctcactactggtcttcttctt
gtcactatgttgattggtaatatcaaggtattcttgcatgcaacaacatcaaagaaacaa
gcaatgcaactaaaaatgagaaatgtagaatggtggatgaggagaagaaggttgcctcaa
ggattcaagcaaagggtcagaaattatgaaaggcatagatttgcagcaacaagaggagtt
gatgaatatgagatgataagcaaccttcctgagggacttagaagagacatcaaatatcat
ctttgtttggacttggttagacaggttcctttgtttcaacatatggataatttggtcctg
gagaacatatgtgatcgcgtcaagtccttgattttcacaaagggggaaaccataacaaga
gaaggtgatccagttcagagaatgttgttcatagtgagaggccatctccaaagcagtcaa
gaacttcgagatggtgtcgaaagctgttgcatgctaggccctggaaacttcagcggcgac
gaacttctctcatggtgcctccggaaacccttcgtggagcgtctcccgccttcctcctca
tcgctagtgactctcgagacgacagaagcgtttggcctcgaagcagatgatgtcaagtat
gtcactcaacattttcgctacacatttgtgaatgagaaagtgaagagaagcgccagatat
tattctccaggatggcgaacttgggctgccgttgctattcagttggcctggaggagatat
agacaccggctgactctcacatcattgtcgtttattagaccaagaagaccgctgtctcga
tcttcttcgttaacagaagacagactcaggctttatacagctttgctcacttcaccaaag
cctaatcaggatgattttgatttttaa
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