Solanum tuberosum (potato): 102593467
Help
Entry
102593467 CDS
T02981
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot04120
Ubiquitin mediated proteolysis
sot04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102593467
04120 Ubiquitin mediated proteolysis
102593467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sot04121
]
102593467
Enzymes [BR:
sot01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102593467
Ubiquitin system [BR:
sot04121
]
Ubiquitin ligases (E3)
U-box type E3
102593467
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
baeRF_family5
Motif
Other DBs
NCBI-GeneID:
102593467
NCBI-ProteinID:
XP_006347208
UniProt:
M1AAI0
LinkDB
All DBs
Position
Un
AA seq
1019 aa
AA seq
DB search
MVTCKPQRTPAEIEDIILRKILLVSLVDSLVSDTRIVYLEMTAAEFLSEGKELKLSRDLM
ERVLIDRLSGNFVSAEPPFQYLVNCYRREHEEGKKIASMKDKNVRSEMGLVVKQVKRLVV
SYCRIHLGNPDMFPNWDMAPANVSLLLPLLFSEFSTSVDEYGGSSGSGGVSSPPGFLDEL
FKDGNCDNMEPILKQLYEDLRGTVLNVSVLGNFQQPLRALLFLVKYPVGAKCLVNHPWWI
PDSQYMNGRVIEMTSILGPFFHVSALPDHTIFKSQPDVGQQCFSESATGRPADLLSSYTT
ITTVMNNLYDGLTEVLMTLLKNSTTRENVLGYLATVINKNSSRAKLQVDPLSCASSGMFV
NLSVVMLRLCEPFLDVNLTKRDKIDPQYVFSSTRLELRELTALHASSEEVSEWINQNNPG
KVDVSKDGSVGKNQLLASQEATSSGNDNGGPSILHYNNPISSSEKAKYPFICECFFMTAR
VLNLGLLKAFSDFKHLVQDISRCKDDLSTMKTMLEQTPSPQLQQEISHLEKDLESYSQEE
LCYEAQILRDGGLLQRALSFYRLMLVWLVGLVGGFKMPLPSPCPMEFASMPEHFVEDTME
LLSFASRIPEALDGVLLDDFMNFIILFMASPEYIRNPYLRAKMVEVLNCWMPRDYSSTAM
STLFEGHQLSLQYLVKNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHQNA
WRRIAKEEEKGVYLNFLNFLINDSIYLLDESLGKILELKELEAEMSNTEEWERKPAQERQ
ERTSLFHSQENIIQTDMKLANEDVSLLAFTSEQITVPFLLPEMVERVASMLNYFLLQLVG
PQRKSLSLKDPEKYEFRPKELLKQIVKIYVHLARGDKENIFPAAIIRDGRSYSDQIFSAA
VDVLGRIGEDMSIIQEFIDLAAKAKTAASEALDAEAALGDIPDEFLDPIQYTLMKDPVIL
PFSRKTMDRPVIQRHLLSQSTDPFSRSHLTADMLIPNTKLKAKIEEFIRSHEPQKTLED
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggtgacttgtaaaccacagagaacgccggcagagatcgaagatataattcttcggaaa
atcttacttgtatctctagttgattcattagtaagcgatacacgcattgtgtatctagag
atgacggcggcggagtttttgagtgagggtaaagagttaaagttgtctagggatttgatg
gagagggttttaatcgaccgactttccggtaattttgtatcggcggaaccaccatttcag
tatttggtcaattgttaccgtcgggaacatgaagaggggaagaagattgcgtcgatgaag
gataagaatgttaggtctgagatgggattggtggttaagcaagtaaagagacttgttgta
tcatactgtaggatacatttaggaaatcctgatatgtttcccaattgggatatggcacca
gcaaatgtatctctgttgcttcctttgttgttttccgagttttcaacttctgtggatgaa
tatggtgggagcagtggtagtggtggagtttcaagtccgcctgggtttttggatgagtta
tttaaggatgggaattgtgataatatggaaccaatactgaagcagttgtatgaggatttg
agagggactgtgctaaatgtttcagttttgggtaattttcagcagcctctcagagcttta
ttgtttttggttaagtatccagtaggtgcaaagtgtttggtgaatcatccttggtggatt
ccggatagtcagtatatgaatggaagagttattgagatgacaagcattttgggtcctttc
tttcatgtcagtgctttgcctgaccatacaatcttcaagagtcaaccggatgttggccag
cagtgtttctctgaatcggccacaggtcgtcctgctgatctcttgtcttcttacacaaca
atcacaactgttatgaataacttgtatgatggcttgacagaagttctgatgactcttctg
aaaaattcaaccactcgtgaaaatgtccttggatatcttgcaacagttataaacaaaaat
tcgtcaagggcaaagttgcaggttgatccattatcttgtgctagttcaggcatgtttgta
aatctcagtgtcgttatgcttcggctttgtgaacctttcttagatgtcaatttgacaaaa
cgggacaagattgatccccaatatgtgttttctagcacccgtctggaactgagggagttg
actgctctgcatgcatcatcagaagaagtctctgaatggataaatcaaaataatcctggg
aaagttgatgtctctaaagatggcagtgttggaaaaaatcagttgttggcatctcaggaa
gctacaagctcggggaatgacaatggtggaccttcaattctccactataacaacccaata
tcaagtagtgagaaagctaaataccccttcatatgtgaatgcttcttcatgactgcacgg
gtgctcaacctcggcctcctaaaagcattttcagactttaagcatcttgttcaggacatt
tcaagatgtaaagatgatttgtctaccatgaaaaccatgctagaacaaacaccctcgcca
cagttgcagcaggaaatatctcacttggaaaaagatcttgagtcgtattcacaggaagaa
ttatgctatgaagcccaaatactgagggatggaggacttctccagcgtgcattatccttc
tacaggttgatgcttgtttggctggtcgggcttgttggtggttttaagatgcctttacct
tccccttgccctatggagtttgcatctatgcctgagcacttcgttgaagataccatggag
ctgctaagttttgcttctcggattcctgaagctttggatggtgtcttgctggacgacttc
atgaatttcattatcttgttcatggcaagtccagaatatatcagaaacccttaccttaga
gcaaagatggttgaagttctaaactgttggatgccccgtgattacagctctactgcaatg
tctactttgtttgaggggcatcaactctctctgcagtaccttgtgaaaaatcttttgaag
ctttatgttgacattgaatttacaggttcccacacgcagttctatgataaatttaatatc
cgccacaacattgctgaactacttgaatatctttggcaagttccaagtcaccagaatgca
tggagacggatcgcgaaggaggaggagaagggtgtttatttgaatttcttaaacttcttg
attaatgatagcatctatcttctcgatgaaagtctcggtaaaattcttgaactaaaagag
ctggaagctgaaatgtctaacacagaggaatgggagcgaaaaccagctcaagaaaggcag
gagagaaccagtctgttccattcacaagagaatataattcaaactgatatgaaattggca
aatgaagatgtgagcctgttagcatttacttcagaacaaatcactgtcccttttcttctt
cctgagatggtggaaagagttgctagcatgttgaattacttcttactacagctggtaggt
ccacaaagaaaatctcttagcttgaaagaccctgaaaagtatgaatttcgtccgaaagag
ttgctcaaacagattgtgaaaatatatgtgcatttggcgagaggagataaggagaacatc
tttccagctgcaattataagagatggtcgatcgtacagtgatcagatatttagtgctgca
gttgatgtccttggaagaattggtgaagatatgagtatcatacaagagttcatcgacctt
gctgcaaaggccaagactgcagcttcagaagcactggatgctgaggctgctcttggagac
attcctgatgaattccttgacccgatccaatatactttaatgaaggatcctgtcattctt
cccttttcgaggaaaacaatggaccggcctgttattcagcggcaccttcttagtcagagt
acagacccatttagccggtctcatctaactgcggacatgttgattcccaacaccaagttg
aaggcgaaaatcgaagagttcatccggtcccatgaaccgcagaagactttggaggattag
DBGET
integrated database retrieval system
