KEGG   Solanum tuberosum (potato): 102593467
Entry
102593467         CDS       T02981                                 
Name
(RefSeq) probable ubiquitin conjugation factor E4
  KO
K10597  ubiquitin conjugation factor E4 B [EC:2.3.2.27]
Organism
sot  Solanum tuberosum (potato)
Pathway
sot04120  Ubiquitin mediated proteolysis
sot04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    102593467
   04120 Ubiquitin mediated proteolysis
    102593467
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sot04121]
    102593467
Enzymes [BR:sot01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102593467
Ubiquitin system [BR:sot04121]
 Ubiquitin ligases (E3)
  U-box type E3
   102593467
SSDB
Motif
Pfam: Ufd2P_core U-box baeRF_family5
Other DBs
NCBI-GeneID: 102593467
NCBI-ProteinID: XP_006347208
UniProt: M1AAI0
LinkDB
Position
Un
AA seq 1019 aa
MVTCKPQRTPAEIEDIILRKILLVSLVDSLVSDTRIVYLEMTAAEFLSEGKELKLSRDLM
ERVLIDRLSGNFVSAEPPFQYLVNCYRREHEEGKKIASMKDKNVRSEMGLVVKQVKRLVV
SYCRIHLGNPDMFPNWDMAPANVSLLLPLLFSEFSTSVDEYGGSSGSGGVSSPPGFLDEL
FKDGNCDNMEPILKQLYEDLRGTVLNVSVLGNFQQPLRALLFLVKYPVGAKCLVNHPWWI
PDSQYMNGRVIEMTSILGPFFHVSALPDHTIFKSQPDVGQQCFSESATGRPADLLSSYTT
ITTVMNNLYDGLTEVLMTLLKNSTTRENVLGYLATVINKNSSRAKLQVDPLSCASSGMFV
NLSVVMLRLCEPFLDVNLTKRDKIDPQYVFSSTRLELRELTALHASSEEVSEWINQNNPG
KVDVSKDGSVGKNQLLASQEATSSGNDNGGPSILHYNNPISSSEKAKYPFICECFFMTAR
VLNLGLLKAFSDFKHLVQDISRCKDDLSTMKTMLEQTPSPQLQQEISHLEKDLESYSQEE
LCYEAQILRDGGLLQRALSFYRLMLVWLVGLVGGFKMPLPSPCPMEFASMPEHFVEDTME
LLSFASRIPEALDGVLLDDFMNFIILFMASPEYIRNPYLRAKMVEVLNCWMPRDYSSTAM
STLFEGHQLSLQYLVKNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHQNA
WRRIAKEEEKGVYLNFLNFLINDSIYLLDESLGKILELKELEAEMSNTEEWERKPAQERQ
ERTSLFHSQENIIQTDMKLANEDVSLLAFTSEQITVPFLLPEMVERVASMLNYFLLQLVG
PQRKSLSLKDPEKYEFRPKELLKQIVKIYVHLARGDKENIFPAAIIRDGRSYSDQIFSAA
VDVLGRIGEDMSIIQEFIDLAAKAKTAASEALDAEAALGDIPDEFLDPIQYTLMKDPVIL
PFSRKTMDRPVIQRHLLSQSTDPFSRSHLTADMLIPNTKLKAKIEEFIRSHEPQKTLED
NT seq 3060 nt   +upstreamnt  +downstreamnt
atggtgacttgtaaaccacagagaacgccggcagagatcgaagatataattcttcggaaa
atcttacttgtatctctagttgattcattagtaagcgatacacgcattgtgtatctagag
atgacggcggcggagtttttgagtgagggtaaagagttaaagttgtctagggatttgatg
gagagggttttaatcgaccgactttccggtaattttgtatcggcggaaccaccatttcag
tatttggtcaattgttaccgtcgggaacatgaagaggggaagaagattgcgtcgatgaag
gataagaatgttaggtctgagatgggattggtggttaagcaagtaaagagacttgttgta
tcatactgtaggatacatttaggaaatcctgatatgtttcccaattgggatatggcacca
gcaaatgtatctctgttgcttcctttgttgttttccgagttttcaacttctgtggatgaa
tatggtgggagcagtggtagtggtggagtttcaagtccgcctgggtttttggatgagtta
tttaaggatgggaattgtgataatatggaaccaatactgaagcagttgtatgaggatttg
agagggactgtgctaaatgtttcagttttgggtaattttcagcagcctctcagagcttta
ttgtttttggttaagtatccagtaggtgcaaagtgtttggtgaatcatccttggtggatt
ccggatagtcagtatatgaatggaagagttattgagatgacaagcattttgggtcctttc
tttcatgtcagtgctttgcctgaccatacaatcttcaagagtcaaccggatgttggccag
cagtgtttctctgaatcggccacaggtcgtcctgctgatctcttgtcttcttacacaaca
atcacaactgttatgaataacttgtatgatggcttgacagaagttctgatgactcttctg
aaaaattcaaccactcgtgaaaatgtccttggatatcttgcaacagttataaacaaaaat
tcgtcaagggcaaagttgcaggttgatccattatcttgtgctagttcaggcatgtttgta
aatctcagtgtcgttatgcttcggctttgtgaacctttcttagatgtcaatttgacaaaa
cgggacaagattgatccccaatatgtgttttctagcacccgtctggaactgagggagttg
actgctctgcatgcatcatcagaagaagtctctgaatggataaatcaaaataatcctggg
aaagttgatgtctctaaagatggcagtgttggaaaaaatcagttgttggcatctcaggaa
gctacaagctcggggaatgacaatggtggaccttcaattctccactataacaacccaata
tcaagtagtgagaaagctaaataccccttcatatgtgaatgcttcttcatgactgcacgg
gtgctcaacctcggcctcctaaaagcattttcagactttaagcatcttgttcaggacatt
tcaagatgtaaagatgatttgtctaccatgaaaaccatgctagaacaaacaccctcgcca
cagttgcagcaggaaatatctcacttggaaaaagatcttgagtcgtattcacaggaagaa
ttatgctatgaagcccaaatactgagggatggaggacttctccagcgtgcattatccttc
tacaggttgatgcttgtttggctggtcgggcttgttggtggttttaagatgcctttacct
tccccttgccctatggagtttgcatctatgcctgagcacttcgttgaagataccatggag
ctgctaagttttgcttctcggattcctgaagctttggatggtgtcttgctggacgacttc
atgaatttcattatcttgttcatggcaagtccagaatatatcagaaacccttaccttaga
gcaaagatggttgaagttctaaactgttggatgccccgtgattacagctctactgcaatg
tctactttgtttgaggggcatcaactctctctgcagtaccttgtgaaaaatcttttgaag
ctttatgttgacattgaatttacaggttcccacacgcagttctatgataaatttaatatc
cgccacaacattgctgaactacttgaatatctttggcaagttccaagtcaccagaatgca
tggagacggatcgcgaaggaggaggagaagggtgtttatttgaatttcttaaacttcttg
attaatgatagcatctatcttctcgatgaaagtctcggtaaaattcttgaactaaaagag
ctggaagctgaaatgtctaacacagaggaatgggagcgaaaaccagctcaagaaaggcag
gagagaaccagtctgttccattcacaagagaatataattcaaactgatatgaaattggca
aatgaagatgtgagcctgttagcatttacttcagaacaaatcactgtcccttttcttctt
cctgagatggtggaaagagttgctagcatgttgaattacttcttactacagctggtaggt
ccacaaagaaaatctcttagcttgaaagaccctgaaaagtatgaatttcgtccgaaagag
ttgctcaaacagattgtgaaaatatatgtgcatttggcgagaggagataaggagaacatc
tttccagctgcaattataagagatggtcgatcgtacagtgatcagatatttagtgctgca
gttgatgtccttggaagaattggtgaagatatgagtatcatacaagagttcatcgacctt
gctgcaaaggccaagactgcagcttcagaagcactggatgctgaggctgctcttggagac
attcctgatgaattccttgacccgatccaatatactttaatgaaggatcctgtcattctt
cccttttcgaggaaaacaatggaccggcctgttattcagcggcaccttcttagtcagagt
acagacccatttagccggtctcatctaactgcggacatgttgattcccaacaccaagttg
aaggcgaaaatcgaagagttcatccggtcccatgaaccgcagaagactttggaggattag

KEGG   Solanum tuberosum (potato): 102595360
Entry
102595360         CDS       T02981                                 
Name
(RefSeq) probable ubiquitin conjugation factor E4
  KO
K10597  ubiquitin conjugation factor E4 B [EC:2.3.2.27]
Organism
sot  Solanum tuberosum (potato)
Pathway
sot04120  Ubiquitin mediated proteolysis
sot04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    102595360
   04120 Ubiquitin mediated proteolysis
    102595360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sot04121]
    102595360
Enzymes [BR:sot01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102595360
Ubiquitin system [BR:sot04121]
 Ubiquitin ligases (E3)
  U-box type E3
   102595360
SSDB
Motif
Pfam: Ufd2P_core U-box
Other DBs
NCBI-GeneID: 102595360
NCBI-ProteinID: XP_006338399
UniProt: M0ZM28
LinkDB
Position
Un
AA seq 1040 aa
MATSKPQRTPAEIEDIILRKILLVSLVDSMENDTRVVYLEMTAAEILSEGKELRLSRDLM
ERVLIDRLSGNFVSAEPPFQYLVNCYRRAHEEGKKIASMKDKNVRSEMELVVKQVKRLAV
SYCRIHLGNPDMFPNWDMAPANVSLLLPLLFSEVSSSVDVFGGSSGSGGVSSPPGFLDEL
LKDADFDSMDPILKQLYEDLRGTVLKVSALGNFQQPLRALLFLVKYPVGAKCLVNHPWWI
PNSVYMNGRVIEMTSILGPFFHVSALPDHTIFKSQPDVGQQCFSESATRRPADLLSSFTT
IKTVMNNLYDGLAEVLMSLLKNSTIRENVLGYLAAVINKNSSRAQLQVDPLSCASSGMFV
NLSAVMLRLCEPFLDANLTKRDKIDPQYVFSSTRLELRGLTALHASSEEVSEWINQNNPG
KVDVAKEGSDGENRLLASQEATSSGNDSGGPSILHYNNPISSSSEKAKYPFICECFFMTA
RVLNLGLLKAFSDFKHLVQDISRSEDNLSTMKTMLEQTPSPQLQQEIARLEKDLESYSQE
KLCYEAQILRDGGLLQRALSFYRLMVVWLVELVGGFKMPLPSPCPMEFSSMPEHFVEDAM
ELLIFASRIPRALDGVLLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWMPRRSGSTA
TSTLFEGHQLSLEYLVKNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRN
AWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWEQRPAQER
QERTRLFHSQENIIRIDMKLANEDVSLLAFTSEQITVPFLLPEMVERVASMLNYFLLQLV
GPQRKSLSLKDPEKYEFRPKELLKQIVKIYVHLARGDKEKIFPAAIIRDGRSYSDQIFSA
AADVLRRIGEDMRIIQEFIDLGAKAKIAASEAMDAEAALGDIPDEFLDPIQYTLMKDPVI
LPSSRITVDRPVIQRHLLSDSTDPFNRSHLTADMLIPDTELKAKIEEFIRSHELKKPGED
LNLQHTKTTIQTTDTLNLIE
NT seq 3123 nt   +upstreamnt  +downstreamnt
atggcgacttctaaaccacagaggacgccggcggagatcgaggatataattcttcggaaa
attttacttgtatctctagttgattcaatggaaaatgatacacgcgttgtgtatttagag
atgacggcggccgagattttgagcgagggtaaagaattaaggttgtctagggatttgatg
gagagggttttaatcgatcgactttctggtaattttgtatccgcggaaccaccttttcag
tatttggtcaactgttaccgtcgggcacatgaagaagggaagaagattgcgtcgatgaag
gataagaacgttaggtctgagatggaattagtggttaagcaagtaaagagacttgctgta
tcatactgtaggatacatttaggaaatcctgatatgtttcccaattgggatatggcacca
gcaaatgtatctctgttgcttcctttgttgttttctgaggtttcaagttctgtggatgtg
tttggtgggagtagtggtagtggaggagtgtcgagtccacctgggtttttggatgagtta
ttaaaggatgcggattttgatagtatggacccaatactgaagcagttgtatgaggatttg
agagggactgtgctaaaggtttcagctttgggtaattttcagcagcctcttagagcttta
ttatttttggttaagtatccagtaggtgccaagtgtcttgtgaatcatccttggtggatt
ccaaatagtgtttatatgaatggaagagttatcgaaatgacaagcattttgggtcctttc
tttcatgtcagtgctttgcctgatcatacaatcttcaagagtcagccggatgttggccag
cagtgtttctcagaatcggccacacgtcgtcctgctgatctcttgtcttctttcacaaca
atcaaaactgttatgaataacttgtatgatggcttggcagaagtgcttatgtctcttctg
aaaaattcaactattcgtgaaaatgtccttggatatcttgcagcagttataaacaaaaat
tcgtcaagggcacagttgcaggttgatccattatcttgtgctagttcaggcatgtttgta
aatctcagtgccgttatgcttcggctctgtgaacctttcttagatgccaatttgacaaaa
cgggacaagatcgatccccaatatgtgttttctagcacccgtctggaactgagggggttg
actgctctgcatgcatcatcagaagaagtctctgaatggataaatcaaaataatcctggg
aaagttgacgtcgctaaagaaggcagtgatggagaaaatcggttgttggcatctcaggaa
gctacaagctctgggaatgattctggtggaccttcaattctccactataacaacccaata
tcaagtagtagtgagaaagctaaataccccttcatatgtgaatgcttcttcatgactgca
cgggtgctcaacctgggcctcctaaaagcattttcagattttaagcatcttgttcaggac
atttcaagatccgaagataatttgtctaccatgaaaaccatgctagaacaaacaccctcg
ccacagttgcagcaggaaatagctcgcttggaaaaagatcttgaatcgtattcacaggag
aaattatgctatgaagcccaaatactgagggatggagggcttctccagcgtgcattatcc
ttctacaggttgatggttgtttggctggtcgagcttgttggtggttttaagatgccatta
ccttccccttgccctatggagttttcatctatgcctgagcactttgttgaagatgccatg
gagctgctaatttttgcttctcgaattcccagagctttggatggtgtcttgctggatgac
ttcatgaatttcattatcatgttcatggcaagtccagaatatatcagaaacccttacctt
agagcaaagatggttgaagtcctaaactgttggatgccccgcagaagcggctctactgca
acgtctactttgtttgaggggcatcaactctctctggagtaccttgtgaaaaatcttttg
aagctttatgttgacattgaatttacaggttcccacacacagttctatgataaatttaat
atccgccacaacattgctgaactgcttgaatatctttggcaagttccaagtcaccggaat
gcatggagacagattgccaaggaggaggagaagggtgtttacttaaatttcttaaacttc
ttgattaatgatagcatctatcttctcgatgaaagtcttaataaaattcttgaactaaaa
gagctggaagctgaaatgtctaacacagcggaatgggagcaaagaccagctcaagaaagg
caggagagaacccgtctgttccattcacaagagaatataattcgaattgatatgaagttg
gcaaatgaagatgtgagcctgttagcatttacttcagaacaaattactgtcccttttctt
cttcctgagatggtggaaagagttgctagcatgttgaattacttcttactacagctggtg
ggtccacaaagaaaatctcttagcttgaaagaccctgaaaagtatgaatttcgtccgaaa
gagttgctgaaacagattgtgaaaatatatgtgcatttggcaagaggagataaggagaaa
atttttccagctgcaattataagagatggccgatcgtacagtgatcagatatttagtgct
gcagctgatgtccttagaagaattggtgaagatatgaggatcatacaagagttcatcgac
cttggtgcaaaggccaagattgcagcttcagaagcaatggatgctgaggctgctcttgga
gacattcctgatgaattccttgatccaatccaatatactttaatgaaggatcctgtcatt
cttccttcttcgaggataacagtggaccggcctgttattcagcggcaccttcttagtgat
agtacagacccatttaaccgatctcatctaactgcggacatgttgattcccgacaccgag
ttgaaggcgaaaatcgaagagttcatccggtcccatgaactgaagaagcctggggaggat
ttgaatttgcaacacacaaaaacaaccatacaaacaactgatactttaaatttgattgag
tag

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