Solanum tuberosum (potato): 102593580
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Entry
102593580 CDS
T02981
Name
(RefSeq) WD-40 repeat-containing protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03082
ATP-dependent chromatin remodeling
sot03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102593580
03083 Polycomb repressive complex
102593580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sot03036
]
102593580
Chromosome and associated proteins [BR:
sot03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
102593580
Histone modification proteins
HAT complexes
HATB complex
102593580
HDAC complexes
Sin3A-HDAC complex
102593580
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
102593580
PRC2.2
102593580
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
102593580
Heterochromatin formation proteins
Other heterochromatin formation proteins
102593580
Chromatin remodeling factors
NuRD complex
102593580
NuRF complex
102593580
NuRF complex (fruit fly)
102593580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_RFWD3
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
ANAPC4_WD40
Beta-prop_RIG_1st
eIF2A
Beta-prop_HPS5
MIOS_WD40
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
102593580
NCBI-ProteinID:
XP_006349413
UniProt:
M1C6W9
LinkDB
All DBs
Position
Un
AA seq
424 aa
AA seq
DB search
MGKDEDEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLEDAENDARHYDDDRSEFGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLRGHSTE
GYGLSWSQFKQGHLLSGSDDAHICLWDINATPKNKALEAMQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDQYLHVWDLRTPSVTKPIQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKISTALHTLDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDLPGDDP
PKGP
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagacgaagatgagatgaggggtgaaattgaggagaggctgataaacgaggag
tacaagatttggaagaagaatacaccttttctttacgatctggttattactcacgcgctt
gaatggccttcgctcaccgtcgaatggttaccggaccgggaagaaccgtccggaaaggat
tattccgttcagaagatgattttggggactcatacatcggaaaatgagcccaattatctc
atgcttgctcaggttcagcttcctcttgaggatgctgagaatgatgcccgacactatgat
gatgatcggtctgaatttggcggatttggttgtgccaatggcaaggtacaaataatccag
caaataaatcatgatggagaggttaatcgggctcgatatatgccccaaaacccatttatc
attgcaactaagacagttagtgctgaagtatatgtttttgactacagtaaacatccatct
aagcctcctctagatggtgcatgcaatccagatttgaggttaagaggccacagtacagag
ggctacggtttgtcttggagtcaatttaagcagggtcatttattgagtggttcagatgac
gcacatatatgtttatgggacattaatgccactcccaaaaataaggctctagaggctatg
cagatatttaaggttcatgaaggtgttgttgaggatgtagcttggcatctgaggcatgag
tatttatttggctctgttggggatgatcagtatctgcacgtctgggatctgcgaactcca
tcagtaaccaagcctatacaatctgtagttgcacatcaaagtgaggttaactgcttagct
ttcaacccctttaatgaatgggttgtagcaacagggtctacagacaagacagttaaatta
tttgatctacgcaagatttctactgcacttcatactttggattgtcacaaagaggaagtt
ttccaggttggttggaatccgaagaatgaaaccattttagcttcttgttgccttggtagg
agactcatggtttgggatctcagcaggatcgatgaggaacaaactccagaagatgcagaa
gatggaccaccagagttgctctttattcatggtggccatacaagtaaaatttcagacttc
tcatggaacccatgtgaagattgggtcgttgctagtgttgctgaggataatatactacaa
atttggcagatggctgaaaacatctaccatgatgaagatgacctgcctggagatgacccc
cccaaaggtccctag
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integrated database retrieval system
