Solanum tuberosum (potato): 102593799
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Entry
102593799 CDS
T02981
Symbol
PTB1
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sot03041
]
102593799 (PTB1)
Spliceosome [BR:
sot03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102593799 (PTB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RL
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
102593799
NCBI-ProteinID:
NP_001274797
UniProt:
I1SWI9
LinkDB
All DBs
Position
Un
AA seq
441 aa
AA seq
DB search
MSDPSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAVKALQF
YSNVQPSIRGRNVYVQFSSHQELTTMDQNAQGRGDEPNRILLVTIHHMLYPITVDVLHQV
FSPHGFVEKIVTFQKSAGFQALIQYQVQQSSVSARNSLQGRNIYDGCCQLDIQFSNLDEL
QVNYNNERSRDYTNPNLPSEQKGKSSQQGYGDMYSFQGSGAHPGGFPQMGNAEAIAAAFA
GGLPPGISGTNDRCTILVSNLNSDRINEDKLFNLCSLYGNIVSIKILRNKPDHALVQLGD
GFQAELAVHFLKGAMLFEKRLEVNFSKYPNITTGPDTHDYSNSNLNRFNRNAAKNYRYCC
SPTKMIHLSSLPQDVTEAEIIAHLEEHGPIINSKLFEMNGKQQALVLFDKEEQATEALVC
KNATSLGSSTIRISFSQLQSI
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatccttcaaaggttgttcatgttcgcaatgtggggcatgagatctcggagaat
gacttgcttcaactattccaaccatttggcgtaattaccaaacttgtaatgcttagggca
aaaaatcaggccctcttgcaaatgcaagatgtcccttcagctgtaaaggcattgcaattc
tactcaaatgttcaacccagcataagggggaggaatgtttacgttcaattctcatctcac
caagaattgacaactatggatcagaatgcacaaggccgtggagatgagcctaatcgaatt
ctcttagtcacaatacatcacatgctataccctataaccgtggatgtgctgcatcaagtg
ttttctccacatggatttgtagagaagattgtcacatttcagaagtcggctggttttcaa
gctttgatccagtatcaagtacaacagagttctgtttctgcaaggaactcacttcagggg
cgtaatatatatgatggctgctgtcagcttgacatacagttctctaacctagatgaattg
caagtgaactacaataatgaacgttcaagggactacactaacccaaatctaccatcagaa
cagaagggcaaatcctctcaacaaggatatggagacatgtactccttccaaggttctgga
gctcatccaggtggatttcctcagatgggaaatgcagaagcaattgcagctgcgtttgct
ggtggtttgccacctggaattagtgggacaaatgacagatgtactattcttgtttctaat
ttaaattcagatagaataaatgaggacaaactttttaacctgtgctctctttatggaaat
attgtcagcattaagattctgcgcaataaaccagatcatgctttggttcagctgggtgat
gggttccaggcagagctggctgttcactttttgaagggtgccatgttatttgaaaagcgt
ctggaagtcaacttctcaaagtaccccaatattactacagggccggacacacatgactac
tcaaattcaaatctcaaccgctttaaccgtaatgctgctaaaaactataggtactgctgc
tcccctaccaaaatgatccacctatcctccttaccccaggatgtaacggaggcagagatt
attgcacatttggaggagcatggtcccatcatcaatagtaagctttttgagatgaatggc
aaacagcaagctcttgttctttttgacaaggaagagcaggcaactgaggcactcgtatgc
aaaaatgctacatctcttggtagctcaaccatccggatttcattttctcagttacagagc
atctga
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