Solanum tuberosum (potato): 102594563
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Entry
102594563 CDS
T02981
Name
(RefSeq) BRCT domain-containing protein At4g02110
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102594563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sot03032
]
102594563
03400 DNA repair and recombination proteins [BR:
sot03400
]
102594563
DNA replication proteins [BR:
sot03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
102594563
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
102594563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
102594563
NCBI-ProteinID:
XP_006349254
UniProt:
M1AI15
LinkDB
All DBs
Position
Un
AA seq
1214 aa
AA seq
DB search
MAESEQDMLYDPSKIFIGVRFVLAGFDSPKKEQVRSKLLEAGGVDVNEYGPDCTHLIVDR
TVYDDPLCVAARQDGKILVSGLWVEHSFDVGMPVDHLSIMYRPPRDLTGIPGAKSLILCL
TGYQRQDRDDIMIMVGLMGANFSKPLVANKVTHLICYKFEGEKYELAKKMKKIKLVNHLW
LEDCLRAWEILPEASYDKSGYELEMMETEAKDSEDEQDDIAAIGRERVSFTSPQHSKSPN
QFLLKEEISRNISEIHIQTGLSELGNNKHLGLSASKESKPDLVTTFEGSDKRHLETLGTT
VSRNEDVPQNGNSPTSVSNNARKSPKSCLSNSCVKSYSREKPRKINLIIATEQVESAGCP
PANAVSQHCDNLNISSEKEQNEAEVGSANFPTSNMSCLEMGQSGVLHEKRRVDMLYNGSL
ETSHNPESMLDGGLGVESYSLKKPRKIGLTMALKQIESAGCPPPNIVSQHCDKLNISSEK
EQDGTVVSSAKIPTSKMSCLEKGQSGVLPEKWKVELHKSSPTTSHNPESMVDSDLVEDRG
EELDRHLSLRNNIQFGKGASLHPLQKCDSSIFTSIIQENQQECDEEALQAGTCAVMGLRK
TALSSNLDPVNVHSCDTEHSTGEHNSPRNELQAVKNPSPGNEREDVEKFIRMAELENAVG
NTRSGSKPLKIKTLPKKTLGSGLSLCERDARNQEGTTFHNKTVPSNDSAPSVSWGRKDRD
HQEVLSFAKVEIPPAGSAELSKETEKRKYLDSGKEDVEIAESINNDAETSESKEYDELNV
LTGEVSGVPQFLVTSAEELVVNVDGTDVEDCAVRHDADNKNSEAQKTISGKDTRSNKSTS
AENDVDVKITKGPKYLMKRSNTTNIAAKRAVISRKVAKKKKSENDKKKNEETENEKGLPV
PGEQTVLALDHELNSMDVEKENSPLIDDQSTRYNEHGAGKSSPKCDNKKPLKADVANPRS
LQVTKVGTEQRWFILSGHRLLRKEFEKVIKRLKGHVCRDSHQWSYQATHFIVPDLVRRTE
KLFAAAASGRWILKSDYLTASNEAGRLLDEEKYEWHKKGLTEDLAIDLEAPRKWRLLRER
TGHGAFYGMKIIIYGDCIVPPLDTLKRAVKAGDGTILATSPPYTRFLNSGIDFAVVDETM
PHYDKWVQEFLRCEIPCILADYLVAYVCKPGYPCDSYVQYNTHTWVERSLKNLEDRLEEV
VVDMVPSDDNSKIE
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaagcgagcaagatatgttatacgatccttctaaaatcttcatcggtgtccgt
tttgttcttgctgggttcgattccccgaagaaagaacaggtccggtccaagcttttggag
gctggtggagttgacgtgaacgaatatggcccggattgcactcacctcattgttgataga
acagtttatgatgatcctctgtgtgttgctgcccgacaagatggaaaaattttagtctct
ggcttgtgggttgaacacagttttgatgtgggaatgcctgtcgatcacctctctattatg
tacagacctccaagggatttgactggaatcccaggtgctaaatcactaatactgtgctta
actggatatcagcggcaagaccgagatgatattatgataatggttgggctgatgggtgca
aacttttcaaagccattggttgcaaacaaagtcactcatcttatttgctacaaatttgag
ggagagaaatacgagcttgccaagaaaatgaagaagataaaactagtgaatcacctgtgg
ctagaagattgtttaagggcctgggaaattcttccggaggctagctatgataaaagtggg
tatgagttggagatgatggaaaccgaagccaaggattctgaagatgaacaagacgatatt
gctgcaattggcagagagagagtttctttcactagtcctcaacactcaaagagtcccaat
caattcctcttgaaggaggaaatctctagaaacatctcagagatacacatacagacaggt
ctgtcagaacttggaaacaataagcatctgggattatctgcttcaaaggaatcgaaaccg
gacctggttacaacctttgagggatctgacaagcgacatcttgagacccttggcaccact
gtgagtagaaatgaagatgtgccacaaaatggaaatagtccgacttcagtttctaataat
gctaggaagtctcctaaatcttgtttgtcgaacagttgtgttaaaagttattcccgagaa
aaacctagaaaaattaatctcatcattgccacagaacaagttgagagtgcaggatgtcct
cccgctaatgcggtgagtcaacattgtgataacttgaacatctcctcagagaaagagcag
aatgaagcagaagttggttctgcaaactttcctacaagtaatatgtcatgcctggaaatg
ggccaaagtggtgtactccatgagaaaaggagggtggacatgttatataacggctctctg
gaaactagtcataatccagaaagcatgttagatggtggcctgggtgttgaaagttattcc
ctgaaaaaacctagaaaaattggtctcaccatggccttgaaacaaattgagagtgcagga
tgtcctccccctaatatagtgagccaacattgtgataaattgaacatttcctcagagaaa
gagcaggacggaactgtagttagttctgcaaaaattcctacaagtaaaatgtcatgcctt
gaaaagggccaaagtggtgtactacctgagaaatggaaggttgagttacataaaagctct
ccaacaactagtcataatccagaaagcatggtagatagtgacctggtggaagatcgtggt
gaagagttggacagacatttgtcattgcgcaacaatatccagtttggcaagggtgcaagt
cttcatcccttgcagaaatgtgattcttctattttcacttccataatacaagaaaatcag
caagagtgtgatgaggaggcattgcaagctggcacttgtgcagtcatggggttaagaaag
actgctttgagcagcaatttggaccctgttaatgttcactcatgtgatactgagcattct
actggtgaacataacagcccgaggaatgaactgcaagctgtcaaaaatccatctcctggc
aatgaaagagaagatgttgagaagtttattcggatggccgaattggaaaatgccgtagga
aatactaggtcagggtctaagccattaaagataaaaacccttcccaagaagacactggga
tctggactaagtctctgtgaaagggatgcaagaaatcaggaaggtactacatttcataac
aagactgttccatcaaatgactctgccccttctgtgagctggggcagaaaggacagagat
caccaagaggttctcagctttgcaaaggttgagattccaccagcaggtagtgcagaatta
agcaaagaaacagagaaaagaaagtacttggattctggaaaggaagatgttgaaatagct
gaatccataaataatgatgctgaaacttcagagagcaaagagtatgatgagttgaatgtc
ttaacaggtgaagtcagtggagtaccgcagtttctggttacatctgcagaggaacttgtg
gtgaacgtggatgggactgatgtggaagattgtgctgtgaggcatgatgctgacaacaag
aactctgaagctcaaaagactatttctggcaaggacaccaggtcaaataaatcaacttct
gcagagaatgatgtagatgtgaaaataaccaaaggcccaaaatatttaatgaagaggtca
aacacaactaatatagctgctaaaagagctgtaatttcccgaaaagttgccaaaaagaag
aagtccgaaaatgacaaaaagaagaatgaggaaacagagaatgaaaaaggtttacctgta
ccaggtgaacaaacagtactggcacttgatcatgagttgaactccatggatgtggagaag
gagaatagtcctcttattgatgaccaaagcacgagatataatgaacatggagctggcaaa
agttctccaaaatgtgataacaaaaaacctctaaaggctgatgttgcaaatcctcgctca
ttgcaggttactaaagtaggaactgagcaaaggtggtttatccttagtgggcatcgactg
ctaagaaaggaatttgagaaggtcatcaaacgtttgaaaggacatgtgtgcagagattct
catcaatggtcatatcaagcaactcatttcattgttcctgatctagttcgcagaactgaa
aaattgtttgctgctgcagcctctggaaggtggatcctaaagtctgattatttaacagct
agcaatgaagctggaagactcttggatgaagaaaaatatgaatggcacaaaaagggctta
acagaagatttagcaatcgacttagaagctccaaggaagtggcggcttctgagggagaga
actggacatggtgcattttatggaatgaagataatcatttatggagactgcattgtacca
ccattggatacactgaagcgcgctgtcaaggctggagatggtactatattagcaacttca
cctccttacactcgcttccttaactcaggtatcgattttgctgttgtcgatgagaccatg
ccccattatgataagtgggttcaagaattcctaaggtgtgagataccttgcattttggct
gattacttggtggcttatgtgtgcaagccgggttatccttgtgacagttatgtacaatac
aatactcatacttgggtagaaaggtcattgaaaaaccttgaagatcgcttggaagaagtt
gttgtggatatggtgccatcagatgacaacagtaagatagaatga
DBGET
integrated database retrieval system
