Solanum tuberosum (potato): 102594663
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Entry
102594663 CDS
T02981
Name
(RefSeq) putative tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sot03016
]
102594663
Enzymes [BR:
sot01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
102594663
Transfer RNA biogenesis [BR:
sot03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
102594663
Prokaryotic type
102594663
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
102594663
NCBI-ProteinID:
XP_006348027
LinkDB
All DBs
Position
Un
AA seq
487 aa
AA seq
DB search
MAGLCVRLPQIPVTNLRFSRSSTLKIVRCFSTSPEDLSVQSNKWDPFIKKKVVMRVGYVG
SDYRGLQMQRDEHQLSTIEGELEKAIFKAGGIRDSNFGNLYKIGWARSSRTDKGVHSLAT
MISLKMEIPADAWEDDPNGIALANCVNSSLPENIRVFSILPSKKRFDARRECNARKYSYL
IPAEIIGIKNDSTSSEIEYHIANFNDILNSFEGEHPFHNYTIRSKYRKQSPARNLLKNES
LLKKGRPSSEKEISGSEESDGEQNGKEKGVVTIVEAENQNPEGNCNEKVSHSKDLNSVIP
IQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLGMNYVEVSICGESFMLHQIRKMVGT
AVAIKRNLLPHDILRMSLCKFSRIVLPLAPSEVLVLKGNNFALRNHPGNIIRPEMLTLLE
SDDILKAVDDFYYSTMLPQLSRFLDPSKSPWSEWVEILDANTSIPDSQLEEVRVAWKLWK
AQYDSRT
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcagggctttgtgtgcggcttcctcaaatccctgtcacaaatctgagattttcacgt
tcaagcaccctaaagatagtgcggtgcttttcgacatcacctgaagacttatctgtgcaa
agcaacaaatgggatcctttcatcaaaaagaaagttgtgatgcgcgtgggatacgtgggc
tctgattatcgaggtttgcaaatgcaaagagatgaacatcaactctccaccattgaaggt
gaactggaaaaagctatcttcaaagctggtggtattcgagacagtaattttggaaattta
tataaaattggctgggcgagaagtagtcgaaccgataaaggagttcattccttggcaaca
atgatatctcttaaaatggagattcctgcagatgcatgggaggatgatccaaatgggatc
gctcttgctaattgtgtgaactcaagtcttccagagaatatcagagttttcagtattcta
ccctcaaaaaagaggtttgatgccagaagagagtgtaatgcacgcaagtattcttatctc
attcctgctgaaatcatcgggataaagaatgattcaacttcttctgaaatcgagtaccat
atagccaattttaatgacatactgaattcttttgagggagaacatcctttccacaattac
acaatacgatccaagtacaggaaacaatctcctgccagaaacttgttaaaaaatgagagt
ctcttaaaaaaagggaggccctctagtgagaaagaaatatctgggtctgaggaaagtgat
ggagaacaaaacggtaaagagaagggggtggtgacgattgttgaggctgaaaatcaaaat
ccagaaggcaactgtaatgagaaagttagtcattcaaaggatctcaattctgttatacca
attcaagcaagatggctccatgaacccgatgcaagagataaacttagctctgctcatttc
cgaaggatttttcactgtcattgtggaaaattggagaagttgctcggcatgaattatgtt
gaagtttccatctgtggagagtcattcatgttacatcaaatacgcaaaatggtagggaca
gcagttgcgataaaacgcaatcttctaccacatgatattttgagaatgtcgttatgcaag
ttttcaaggattgtcttacccctagccccatcagaagttttggttttgaaggggaacaat
tttgctttgagaaaccatccaggcaacataataagacctgaaatgttgacattgttggaa
tcagatgatattctcaaggcagttgatgacttctattactctacaatgttacctcagctg
tctagatttttagacccttcaaagtccccttggagtgagtgggtagaaatactggatgca
aacacaagcattccagattctcaattagaagaagtaagggttgcttggaaattgtggaag
gcacaatatgatagcagaacttga
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integrated database retrieval system
