Solanum tuberosum (potato): 102594819
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Entry
102594819 CDS
T02981
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102594819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102594819
03110 Chaperones and folding catalysts [BR:
sot03110
]
102594819
03029 Mitochondrial biogenesis [BR:
sot03029
]
102594819
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sot04147
]
102594819
Enzymes [BR:
sot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
102594819
Messenger RNA biogenesis [BR:
sot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
102594819
Chaperones and folding catalysts [BR:
sot03110
]
Heat shock proteins
HSP60 / Chaperonin
102594819
Mitochondrial biogenesis [BR:
sot03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
102594819
Exosome [BR:
sot04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102594819
Exosomal proteins of other body fluids (saliva and urine)
102594819
Exosomal proteins of breast cancer cells
102594819
Exosomal proteins of colorectal cancer cells
102594819
Exosomal proteins of bladder cancer cells
102594819
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Nuc_N
Motif
Other DBs
NCBI-GeneID:
102594819
NCBI-ProteinID:
XP_006340213
UniProt:
M0ZKX1
LinkDB
All DBs
Position
Un
AA seq
588 aa
AA seq
DB search
MASANAISTASIIPSPSKQGGLKNRKVSQLQGQRFGNKGAKNRFVVKACAKEIAFDQKSR
SALQAGIDKLADAVGLTLGPRGRNVVLDEYGTPKVVNDGVTIARAIELPDAMENAGAALI
REVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVLGLIEELEKK
ARPVKGRDDIKAIASISAGNDESIGTMIADAIDKVGPDGVLSIESSSSLETTVHVEEGME
IDRGYISPQFVTNSEKLIAEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDI
TGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEYQATDLGLLVENTPV
EALGIARKVTITKDSTTIIADAASKDEIQSRIAQLKKELFETDSVYDSEKLAERIAKLSG
GVAVIKVGAATEAELEDRKLRIEDAKNATFAAIEEGIVPGGGAAFVHLSTYVPAIKAKIE
DPDERLGADIIQKALVAPASLIAQNAGVEGEVVVEKVKEAKWEMGYNAMTDIYENLVDAG
VIDPAKVIRCALQNSASVAGMVLTTQAIVVEKAKPKVAAPAAPQGLQV
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgctaatgctatttccactgcttctattatcccttctccttctaaacagggc
ggtttgaagaataggaaggtcagccaattgcagggacagagatttggcaacaagggtgca
aagaaccggtttgtagtcaaggcctgtgctaaagaaattgcctttgaccagaaatctagg
agtgccctgcaggctggtatcgacaagcttgctgatgctgttggcctgactcttggtcca
aggggaaggaatgtagtgttggatgaatatggcacccctaaggtggttaacgatggagtt
acaattgctcgtgccatcgagctacctgatgctatggagaatgctggggctgcccttatc
agggaggttgcaagcaaaaccaatgattcagctggtgatggaaccacaactgcatctgtt
cttgctcgggaaatcattaaactcggtctgctgagtgttacatctggtgcaaatccagtg
tctttaaagaggggcattgacaaaactgtactgggtttgattgaagagctagaaaagaag
gctagacctgttaaaggtcgtgacgacatcaaagctattgcttcaatctctgctggaaat
gatgaaagtattggtaccatgattgcggatgcaattgacaaagttggtccagatggtgtg
ttgtccattgagtcatcctcctccttagagacaactgttcatgttgaagaaggaatggag
attgatagaggatatatttccccacaatttgtcaccaactctgagaaattaattgctgaa
tttgagaatgctagagtcttggttactgatcagaagatctctgctatcaaggatattatc
cctctattagaaaagacaactcaattacgcgcccctctcctcattattgccgaggatatc
accggggaagctctggccactcttgttgtgaacaagttgcggggtatactgaatgttgct
gccatcaaagctcctggatttggtgaaaggagaaaggctcttctgcaagatattgccatt
gtgacaggagctgagtaccaggcaactgatttgggcctgctcgttgagaataccccagtt
gaagcacttggaattgccagaaaggtgacaattaccaaggactcaacaaccatcatcgct
gatgcagcatcaaaggatgagatacaatctaggattgctcagcttaaaaaggagctgttt
gagacggactcggtgtatgactccgagaaacttgctgagagaattgccaagctttctggg
ggtgttgccgtcataaaggttggagctgcaacagaggccgagcttgaagaccgcaagctt
cgtattgaggatgcaaagaatgcaacttttgctgcaattgaagagggaatagtacctggt
ggtggtgctgcttttgttcatttatcaacttatgtccctgccattaaggcgaagattgaa
gacccagatgaaagattgggagctgacatcattcaaaaggcattagtagccccagcatct
ttgatagcccaaaatgctggagttgaaggagaagtagtcgtggagaaggtgaaggaagcc
aaatgggagatgggttataacgcgatgacagacatatatgagaatctcgtggacgctgga
gtcattgatccagccaaggtgataagatgtgccttgcagaattcagcatcagttgcagga
atggttctgactacacaagccatagtggtcgagaaggcaaagcctaaggtggctgcacct
gctgctccacaaggacttcaagtgtga
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