Solanum tuberosum (potato): 102595066
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Entry
102595066 CDS
T02981
Name
(RefSeq) cell differentiation protein RCD1 homolog
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102595066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102595066
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
102595066
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
102595066
NCBI-ProteinID:
XP_006342283
LinkDB
All DBs
Position
Un
AA seq
289 aa
AA seq
DB search
MSNPSERRYRAEQLIMNLGESSIREDVLIELNNFIIEQSTEAMRMDLGFHLWNSELTLTI
LLQEVVAVYPKLLDPTLTMAECTRLCNALNVIQVNIRFGSVVWLLHPDARIGLLKANIPY
FLNPFLRISENVMRPLRFVTLSILNLISALAKFDESYGQEILLLLLDTQVVPLCMHCILH
GDQLIRKVATLILMKILMQEKGLKYCCALPARFLLVIQVLRQLVDTFTSEIPCSQQLKYV
VQCYLSLSRVAWVGGVYDTVRTNIPKQLIDNTFGIITRDDPEFQICCIS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacccgtcggagcgtcgttacagggcggagcaattgataatgaatcttggtgag
agtagtattcgcgaagatgttcttattgaactcaacaatttcatcatagagcagtcaact
gaagcaatgcgcatggatcttggatttcacttgtggaactctgaacttacactcaccata
cttttacaggaagtagtagcagtgtaccccaagcttttagacccaacattaactatggcg
gaatgtactcgactttgtaatgctcttaatgtaattcaggtgaatatacgtttcggttct
gttgtatggcttctccacccagatgcaagaatcgggctcctcaaagcaaacataccatat
tttcttaatccatttctccgaatctctgaaaatgtgatgaggcctctgcgatttgtgaca
cttagcatcttgaatcttatttctgccctagcaaagttcgatgagtcatatgggcaagaa
attcttcttttattgctagacacacaagtagttcctttatgcatgcactgcatccttcat
ggtgatcaactgatacggaaggttgcaacactcatacttatgaaaatcttgatgcaagag
aaagggctaaaatattgttgtgctctccccgctcgttttctgttagtgatacaagtcctg
cgtcaactggtagacacatttacttctgaaatcccttgctcacagcagctaaaatatgtt
gttcaatgctacctaagtctttcgcgagtagcatgggtaggcggggtatatgatacagtg
agaaccaatattccaaaacagctaattgacaacacttttggcatcattactcgtgacgat
ccagagttccaaatatgctgcatcagttag
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