Solanum tuberosum (potato): 102595126
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Entry
102595126 CDS
T02981
Name
(RefSeq) cell differentiation protein RCD1 homolog
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102595126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102595126
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
102595126
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
102595126
NCBI-ProteinID:
XP_006352517
LinkDB
All DBs
Position
Un
AA seq
319 aa
AA seq
DB search
MTNLPQFSIGAGGGFGGFGGVASPSLAGAGASANNDRNMQSAEQLVLDLSNPELRENALL
ELSKKRELFQDLAPLLWNSCATIAALLQEIISIYPVLSPPTLTPALSNRVCNALALLQCV
ASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLS
TEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVARVLGNMVGTL
AEQPSSRLLKHIIRCYLRLSDNPRACDALRGCLPDILGDTTFQSCLRDDPMTRRWLQQLL
HSVNGNRVALQAGGFDHML
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacttacctcagttctcaatcggcgccggcggaggtttcggaggttttggagga
gttgcatcgccgtcgttggccggtgccggagcttcggctaataacgatcgcaacatgcaa
tcggctgaacagctagtgcttgatctcagcaatcctgaacttcgtgaaaatgctcttcta
gagctttctaagaaaagggaacttttccaggatttggcccctttattgtggaactcatgt
gctactatcgctgctctgctacaggagataatttctatctaccctgttttgtcgcctcca
actctgactcctgcactatccaatagagtttgtaatgcactagcacttcttcagtgcgta
gcctctcatcctgacaccagaatgttgttcctcaatgcacatattcctttgtatctgtac
ccctttcttaatacaacgagcaagtcaagaccttttgaatatctgagacttacaagctta
ggtgtcattggtgcccttgtgaaggtggatgacactgaagttatcagttttcttctttca
acagaaataattccgctgtgcttgcgcacgatggagatggggagtgaattatcgaaaact
gttgcaactttcattgtgcaaaaaatccttctagatgatgtgggtctagattacatctgt
accacagcggaaaggttttttgcagtagcccgagttctagggaatatggtcggcacactt
gctgaacaaccttcatcaagattgctgaaacacataattaggtgctatcttcgtttgtca
gataatccaagggcatgtgatgcactgagaggttgtcttcccgatatacttggagatacc
accttccagagttgtcttcgtgacgatccaatgacgaggaggtggctgcaacaattactc
catagcgttaatggaaatcgggttgctttacaggctggaggatttgatcatatgctgtga
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