Solanum tuberosum (potato): 102595189
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Entry
102595189 CDS
T02981
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot00040
Pentose and glucuronate interconversions
sot01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102595189
Enzymes [BR:
sot01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
102595189
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
102595189
NCBI-ProteinID:
XP_006344502
UniProt:
M1BJI2
LinkDB
All DBs
Position
Un
AA seq
435 aa
AA seq
DB search
MGLTKRNLFLFLVLVVLVVSIEAHIKEFDEVWKKRAQQAKKAARHAYNPNPKIVADHLNY
QVDKAVRGSNSRRRDLHRYSGKCMATNPIDQCWRCDPNWARNRMKLTDCVLGFGRKTTGG
KGGKIYVVMDNSDNELVNPKPGTLRHAVIQPEPLWIIFAKNMVIRLNQELIMTSNKTIDA
RGRQVHIAHGGGLMLQFVHNVLISNLHIHDTKAGSGGLIRDSVSHYGYRSKSDGDGISIF
GSTNVWIDHISMSNCQDGLIDAVEGSTAITISNCHFTKHNDVMLFGASDTASGDSVMQIT
LAFNHFGHGLTQRMPRIRWGFVHAVNNDYTHWLMYAIGGSMHPTILSQGNRFIAPPNPNA
KEVTKRDYAPENVWKNWVWKSQGDLMMNGAFFVESGDPKHAFLKGPDMITSKPGSFVSSL
TRFSGSLKCIEGRPC
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgggattgacaaagcgtaatttgtttttgttcttagttttggttgttctagttgttagc
attgaggcacatattaaggagtttgatgaggtgtggaagaagcgagcccagcaagcaaag
aaggccgctcgacatgcctataatcctaatcctaagattgttgctgaccatcttaactac
caagttgacaaggctgtacgaggcagcaatagcagaagaagggacctgcacaggtacagc
ggaaaatgcatggctactaatcctatagaccagtgctggaggtgtgatccaaactgggct
cggaatcgcatgaaattaacagattgcgtccttggctttggtcgcaagacgacgggaggc
aaaggtggaaaaatctatgtagtaatggacaattcagacaacgaattagttaatcctaag
ccgggcacattgcgccacgctgtcatccagccggagccactttggattatatttgctaag
aacatggtaattaggcttaaccaggagcttatcatgacaagcaacaagacgattgatgct
cgaggaaggcaagtgcacattgctcatggtggtggccttatgttacagtttgtacacaat
gtgcttattagtaaccttcacattcatgatactaaggctggtagtggtgggttaattaga
gactccgtcagtcattatggttatcgatcgaaaagtgatggtgatggaatttcaatcttt
ggatcaacaaatgtttggatcgatcacatttccatgtccaattgtcaggatggtctcatt
gatgctgttgagggttccactgccattaccatttccaattgccattttaccaaacataat
gatgtcatgttgtttggtgccagtgatactgcctcaggggactctgttatgcaaataaca
cttgcattcaatcactttgggcacggtttgacgcagaggatgccgagaattagatgggga
tttgttcatgctgtcaacaatgattacacacattggcttatgtatgctattggaggaagc
atgcatcccaccatccttagccaggggaatcgttttatcgctcctccaaatcctaatgcc
aaagaggtgaccaaaagggactatgcacccgagaatgtgtggaagaattgggtgtggaaa
tcacagggagatcttatgatgaacggggcattcttcgtagaatctggagatccaaaacat
gcattcttgaaaggtcctgatatgatcacctccaagccaggatcattcgtgagcagcctg
acgcgattttcaggctctctcaaatgcattgaggggaggccttgttag
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