KEGG   Solanum tuberosum (potato): 102595890
Entry
102595890         CDS       T02981                                 
Name
(RefSeq) nuclear-pore anchor
  KO
K09291  nucleoprotein TPR
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102595890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sot03019]
    102595890
Messenger RNA biogenesis [BR:sot03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102595890
SSDB
Motif
Pfam: TPR_MLP1_2 HypD
Other DBs
NCBI-GeneID: 102595890
NCBI-ProteinID: XP_006350691
UniProt: M1BCI8
LinkDB
Position
Un
AA seq 2049 aa
MPLFISDEEYERCSQDAGLVAVKADEFIRDLYNQLENVKAQADAASITAEQTCSVLEQKY
VSLSSEYSALQLQYSQLNSSFEERLSELSQAQAEKQQAFIQSIGKDGDVDRLSTEASELR
KTKRQLMELVEQKDLEISEKNSTIKSYLDKIVHSTDIAANREVRVCDLETEVSRCQASCS
RLLQEKELVERHNAWLNDELTTKVNGLMELRKAHSELEADMSAKLADAEKKIIECDRRLK
RKEEQVREMELKFTSLEQDLLSSKDVAAAKEDQMSGEIATLNKLVELYKESSEEWSKKAG
ELEGVIKALETHGNQIENDYKERLEKEVSAKIELKEEVACLKNKLAKSEAELKKGEDTLK
LLPLSYFSSESLPNSVEAGDMVEDDRMVVPSLPIGVSGTALAASLLREGWSLSKMYTKYQ
ETVDALRHEQLGRKQAQDVLERVLCEIEEKAGVILDERAEHERLEDAYSVLNEKLQHSLS
QQAALERNIQEFNADMRRRDRDYAVAQAEVVDLQEQVTVLLKECRDIQFRGGSVGPKNDN
SVVSNSLIMFGAESNADDVGRHLSYKDINGLVEQNVQLRGLVRSLTDQIENRESELKEKY
EKELQKHVDKATSQVNAVLAKADEQGTMIKSLHASVAMYRKLFEEHTVVSSDTRSEKVAE
VERQEVMLLPDSSHEVLGRAQERAFERVKCLEEELSRLRSEIISLRSERDKSALEAQFAR
DKLDRYMKDFELQREEHNGVITRNVEFSQLIVDYQKKLRESYESLNAAEELSQKLKLEVS
ILKDEKGMLVNAEKRASDEVRNLSQRVHSLQVHLDTLQSTENVRDEARAAERRKQEEYIK
LIEKEWAEAKKELQEQRDNVRNLIPEREDALKNALRQIEEMRKELASTSHSVAAAEARVV
VAEARSADLEEKLQALQKKVPERADEGGPSSSTELFDNMDSAEEVKRLGEEVQVNKNHML
QYKSIAQANEEALKQMELAYENLKVEADRVKKSMEEEVLSLRKHVDELERECNLKSIEAA
SATAGKEEAVVAALAEISSLKEDTSAKTTQISNLEAQITALKDDLDKEHQRWRAAQDNYE
RQVILQSETIQELTRTSQALATLQEESSELRKLSDILKSENNALKAKWEAELSVLEVSKT
EAEKKYTEANEQNKILLDRLEGLYIKLAEKDRVSSGVSAGSTVAEGDDGLMNVVNYLRRS
KDIAETEISLLRQEKLRLQSQLENALRRVEVAEASLNSERENSRAQVLSEEEFKSLQLQV
RELNLLRESNLQLREENRHNVEECQKLRQAAQKMKTELEDLEKLLNERQADVEACRKEIE
MQKLDKEKLERRVSELVERYKSFDLEEYASLKEAASQMQVNLREKDVELEKIKKAMSEQQ
NLVADLEQDLSRSRTELSQRESKINEILQTEASLRSEVDKQRKLAVLMKKRVENLLKEKE
RADSLSKEKDDLARENQALSKQLEDAKQWKKTADAADEQALKDKEKEKNTRIQGLEKITD
RLREELKQERSKRVKMQKTIGDSYGTVNHQRSKLSDEMDKHKQALKMLTDEVEKIRQTKG
SQTEGTSVDQLLSGTHLEDFAAAYLQAVDDFERVARNELGVSGAGDTSAPDGSLSASVVP
GPAATLPPPASLLTSIPAVGKAEEERRLVLSKITSETRKTGRKLVRPRITKPEEPLVDVE
MQDTDESTNSRKHLPPQNAENLDNATLSTQPPIRKRLSAASTSELQEETPAMDETCLDVA
QPVLKKSKHLEAPQEGGEDKSAGNVENSESLPTTEEHDAGDETQCLKEEASDIEKDETTL
SGEQVEEPSVVATNQAESQVDRTDIADDTFVGSNEVSTPDNESTFLVQQESEQLAMDERE
EGELIADPEDVGNLDSILSMGSPENLEPQTDDLAGTDEDLLLTPTDPGEMESSQLPDDDK
NDEVDATEELAESSDKLNDGGDQVAAETDQAVDTVTGVKPSSSPVDSSNSKEGGPGESAA
AETEEGKQVSPVNRSSRTINLNERARERASIRQAAMLSSTPTRGRGRVLRGRGGRSGRGG
RGPISGSQG
NT seq 6150 nt   +upstreamnt  +downstreamnt
atgccgttgtttatatcggatgaggaatacgagcggtgctcgcaagatgccggtttggta
gcggtgaaagctgatgagtttattcgcgatttgtacaatcaactggaaaatgtgaaagca
caggctgatgctgcatctattacagctgaacagacttgttctgttcttgaacagaagtat
gtctcgctttcttcagagtactccgcgcttcaactgcagtactctcaacttaattcttcc
tttgaggagcgcctgtctgaactctctcaagcacaagccgagaaacagcaagctttcatc
caatctattggaaaggatggagatgtggaccggttatcaacagaggcttcagaactccgg
aaaacaaagaggcaattgatggaattggtagaacagaaagacttggagattagtgagaaa
aattccactatcaaaagctatcttgataagatagttcactcgactgatattgctgcaaat
agggaagtacgggtctgtgacttggagactgaagtgtcacgctgtcaggcttcttgttcg
cggcttttgcaggagaaggagcttgttgagaggcataatgcatggcttaatgacgagtta
acaacaaaggtcaatggtctcatggagctgcgtaaagctcattctgagcttgaggctgat
atgtctgccaaacttgctgatgccgagaaaaaaattattgaatgtgataggcgtttgaag
agaaaagaggaacaagttagagaaatggagttgaagttcacttctctagagcaagattta
ttatcctccaaggatgtagcagctgcaaaagaggaccaaatgtctggtgaaattgcaacg
ttaaacaagctagtggagttgtacaaggagagctccgaggaatggtctaaaaaggcagga
gaacttgaaggagtaattaaagctctggagactcatggaaaccaaatagagaatgactat
aaagagaggctcgagaaagaagtatctgcaaagatagaactaaaggaggaggttgcatgt
ttgaaaaataagcttgcgaaaagcgaagcagaattaaaaaaaggagaagatacattgaag
cttcttcctttgagttatttttctagtgaatcattgccaaactcagttgaagctggtgac
atggttgaggatgatcggatggtcgtacctagtctgccaattggtgtttcaggaaccgca
ttagccgcttcacttcttcgggagggttggagtctgtctaagatgtacaccaaatatcag
gaaactgtcgatgcactacgacatgaacaattgggaagaaaacaagctcaagatgtactg
gagcgagtactctgtgaaatagaggagaaagctggagttatcttggatgagcgagcggag
catgaaagattggaagatgcttactctgtgctaaatgaaaagctgcagcattccctctct
cagcaagctgctttagagaggaatattcaggaattcaatgctgatatgagaaggcgtgac
cgtgattatgctgttgctcaggcagaggtagttgacctccaagaacaggtgacagtgctt
ttaaaggaatgccgtgatatacaattccgtggtggatctgtgggacctaaaaatgacaat
tctgtggtgtcaaattctttaattatgtttggtgctgaatctaatgctgatgatgttgga
aggcacttgagctacaaggacattaatggcctggttgaacaaaatgtccagctaagaggc
ctagttcggagccttactgaccagattgagaacagagagtcagagttgaaggaaaagtat
gagaaggagcttcagaagcatgttgacaaagctacctcccaggttaatgcagtactggca
aaagcggatgaacagggtacgatgattaaatcactccatgcatctgtggcgatgtacaga
aagctctttgaagagcatacagttgtttcttctgatactcgatctgaaaaagtagcagag
gttgagaggcaggaagtgatgcttttgcctgattcttcacatgaagttttagggagagca
caagaacgggcttttgagcgtgtaaaatgtcttgaagaagagttgtcaagattacggagc
gagattatttctcttcggtcagagcgggataagtcagctctggaagcacagtttgctcga
gataaacttgacagatatatgaaagattttgagctccagagagaggagcataatggtgtg
atcacgagaaatgttgagttctcacaattgatagttgactaccagaagaagctgcgagaa
agttatgagtcattgaatgctgctgaggaactttctcaaaagctaaaactggaggtgtct
attctaaaggatgaaaagggtatgctggtaaatgccgaaaagagagcttcggatgaagta
cgtaatttgtcacaaagggtgcatagtttgcaggtccatttagatacactgcagagtact
gagaacgttcgtgacgaggcaagagctgctgagaggagaaagcaagaagagtatatcaag
cttattgagaaagaatgggctgaagctaagaaagaattgcaagaacagcgtgataatgtt
cgaaaccttatacctgagcgagaagatgctctaaagaatgcattgagacaaattgaggaa
atgaggaaggaattggctagcacttcacattctgtggctgctgctgaagctagagttgtg
gttgctgaagcgcgatctgctgatttagaggaaaaattgcaagctttgcaaaaaaaggtt
cctgaaagagctgatgaaggtggtccttcctcttctactgaactttttgacaacatggat
tctgctgaagaagttaaaagactcggagaggaggtgcaggttaacaaaaatcatatgctg
caatataaaagcatagctcaggcaaatgaagaagcattaaagcagatggaattggcctat
gagaacctcaaagtagaagctgatagagtgaaaaaatcaatggaagaggaagtattatcg
cttaggaagcatgttgatgagcttgagagagaatgtaatttgaagtcaattgaagcagct
tctgcaactgcaggaaaagaagaagccgttgttgctgctttagctgaaatatccagtctg
aaagaagatacctctgctaagacgacacaaatctcaaatttggaggctcaaataactgct
ttgaaagatgatttagacaaagagcatcaaagatggcgtgctgctcaagataattatgag
agacaggtaattctgcagtcagaaacaattcaagaactgactagaacatctcaagctttg
gcaaccttacaagaagagtcatctgagctccgtaaattgtcagatattctaaaatcagaa
aataatgcattgaaggccaagtgggaggcagaattgtcggtgctagaagtgtcaaaaact
gaagctgagaagaaatacactgaggctaatgaacagaacaaaatattactggaccggctt
gagggtttgtatattaaactggctgagaaggaccgtgtatcttcaggtgtatctgctgga
agcacagtggccgagggtgacgacgggctgatgaatgttgtgaattatctaagacggtcc
aaggacattgcagaaacagaaatttctttgctcagacaggaaaaacttcggttgcaatca
cagcttgagaatgctctgaggagagtggaggtagcagaagcatcacttaattctgagcgg
gagaattcaagagctcaggttttaagtgaagaggagtttaaatcactgcagcttcaggtt
agagaattgaacttacttcgtgaaagcaacttgcaattgagagaggagaacaggcacaat
gttgaagaatgccagaaacttcgccaagctgcccagaagatgaaaactgaattagaggat
ctggagaagcttcttaatgaaagacaagctgatgtagaagcttgtaggaaagagattgaa
atgcagaagctggataaagagaagcttgagaggagggttagtgagttggttgagaggtat
aagagttttgacctagaagaatatgcaagtctgaaagaagctgcttcacagatgcaggtg
aatctgagagaaaaagatgtagaactggagaaaattaagaaagccatgtctgagcagcag
aatctggtagctgacttagagcaagacctttctaggagcagaacagaattgagtcagaga
gaatcgaaaatcaatgagattttgcaaactgaggcatcgctgagatctgaagttgataaa
caaagaaagttggcagttctaatgaagaaaagggttgaaaacttgttgaaggaaaaggaa
agggcagacagcttatcaaaggaaaaagatgatttggctagagagaatcaagctctctcc
aaacagttggaagatgctaaacaatggaaaaaaactgctgatgctgcagatgaacaggct
ttgaaagataaagaaaaggagaaaaacaccagaatccaggggcttgagaagatcacagac
cgtcttagagaagagttgaaacaagagagatcaaagcgcgtgaagatgcaaaagacaata
ggggattcctatggaactgtgaatcatcaacggtccaagctatcagatgaaatggacaag
cataagcaggctctgaagatgcttaccgatgaagttgagaagataaggcaaaccaaaggc
agtcaaacagagggcacgtcagtggatcaactactttctgggactcacttagaggatttt
gctgctgcatatcttcaggctgtagatgactttgaacgggttgcacgtaatgagctcggg
gtttctggtgctggtgacacttctgctccagatggttctctttctgcctctgttgttcca
ggcccagcagctacgcttccgccaccagctagcttgttgacttccattcctgcagttgga
aaagcagaagaagaaagaagacttgttttatcgaagataacctccgaaactcgtaaaacc
ggaaggaagttggttcgacctcgcatcacaaagccagaggaacctttagttgatgtagag
atgcaagatacagatgaatccaccaacagtaggaaacatttgccacctcaaaatgcagaa
aatctagataatgccacattatcaactcaaccaccaattcgcaagcgcctatctgcagcc
tctacctcagagttacaagaagagactcctgccatggatgaaacctgcttagatgtggct
caacctgtgcttaagaagtccaaacatctagaggcacctcaagaaggtggtgaagataaa
tctgctggtaatgtagaaaattcagaatctctgcctactacggaggaacatgatgctgga
gatgaaacccaatgtttgaaagaggaagccagtgatattgagaaggatgagactacactt
tctggtgagcaggttgaagagccgtcagttgttgcaacaaatcaggctgagtcacaggtt
gatagaacagatattgcagatgatacttttgtcggttctaatgaagtgtctaccccagat
aatgaatcaacatttctggtgcaacaagagagtgagcagctagcgatggatgaaagggaa
gagggagagctaattgctgatcctgaagatgttggaaatcttgatagcattttatcaatg
gggagcccagaaaatttggaacctcagactgatgacttagctggtactgatgaagacctc
ttgcttactccaacagaccccggggagatggaatcttctcagctcccagatgatgataag
aatgatgaagttgatgcgacagaagagctagctgaaagttctgataagttgaatgatggt
ggtgaccaggttgctgcagaaactgatcaggctgtggatactgttactggtgtgaaacca
tcaagcagtccagttgatagtagcaattcaaaagaagggggtccgggtgaaagtgctgct
gctgaaacagaagaagggaaacaggtctcacctgtcaataggagctcaagaactataaac
ttaaatgagagggctagagaaagggcttctattaggcaggctgctatgctttcttctaca
ccgacaagaggccgtgggcgagttcttcgaggtcgcggtgggcgcagtggtcgtggtggt
cgcggtccaatctctggttcacagggttaa

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