Solanum tuberosum (potato): 102595890
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Entry
102595890 CDS
T02981
Name
(RefSeq) nuclear-pore anchor
KO
K09291
nucleoprotein TPR
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102595890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102595890
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102595890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
HypD
Motif
Other DBs
NCBI-GeneID:
102595890
NCBI-ProteinID:
XP_006350691
UniProt:
M1BCI8
LinkDB
All DBs
Position
Un
AA seq
2049 aa
AA seq
DB search
MPLFISDEEYERCSQDAGLVAVKADEFIRDLYNQLENVKAQADAASITAEQTCSVLEQKY
VSLSSEYSALQLQYSQLNSSFEERLSELSQAQAEKQQAFIQSIGKDGDVDRLSTEASELR
KTKRQLMELVEQKDLEISEKNSTIKSYLDKIVHSTDIAANREVRVCDLETEVSRCQASCS
RLLQEKELVERHNAWLNDELTTKVNGLMELRKAHSELEADMSAKLADAEKKIIECDRRLK
RKEEQVREMELKFTSLEQDLLSSKDVAAAKEDQMSGEIATLNKLVELYKESSEEWSKKAG
ELEGVIKALETHGNQIENDYKERLEKEVSAKIELKEEVACLKNKLAKSEAELKKGEDTLK
LLPLSYFSSESLPNSVEAGDMVEDDRMVVPSLPIGVSGTALAASLLREGWSLSKMYTKYQ
ETVDALRHEQLGRKQAQDVLERVLCEIEEKAGVILDERAEHERLEDAYSVLNEKLQHSLS
QQAALERNIQEFNADMRRRDRDYAVAQAEVVDLQEQVTVLLKECRDIQFRGGSVGPKNDN
SVVSNSLIMFGAESNADDVGRHLSYKDINGLVEQNVQLRGLVRSLTDQIENRESELKEKY
EKELQKHVDKATSQVNAVLAKADEQGTMIKSLHASVAMYRKLFEEHTVVSSDTRSEKVAE
VERQEVMLLPDSSHEVLGRAQERAFERVKCLEEELSRLRSEIISLRSERDKSALEAQFAR
DKLDRYMKDFELQREEHNGVITRNVEFSQLIVDYQKKLRESYESLNAAEELSQKLKLEVS
ILKDEKGMLVNAEKRASDEVRNLSQRVHSLQVHLDTLQSTENVRDEARAAERRKQEEYIK
LIEKEWAEAKKELQEQRDNVRNLIPEREDALKNALRQIEEMRKELASTSHSVAAAEARVV
VAEARSADLEEKLQALQKKVPERADEGGPSSSTELFDNMDSAEEVKRLGEEVQVNKNHML
QYKSIAQANEEALKQMELAYENLKVEADRVKKSMEEEVLSLRKHVDELERECNLKSIEAA
SATAGKEEAVVAALAEISSLKEDTSAKTTQISNLEAQITALKDDLDKEHQRWRAAQDNYE
RQVILQSETIQELTRTSQALATLQEESSELRKLSDILKSENNALKAKWEAELSVLEVSKT
EAEKKYTEANEQNKILLDRLEGLYIKLAEKDRVSSGVSAGSTVAEGDDGLMNVVNYLRRS
KDIAETEISLLRQEKLRLQSQLENALRRVEVAEASLNSERENSRAQVLSEEEFKSLQLQV
RELNLLRESNLQLREENRHNVEECQKLRQAAQKMKTELEDLEKLLNERQADVEACRKEIE
MQKLDKEKLERRVSELVERYKSFDLEEYASLKEAASQMQVNLREKDVELEKIKKAMSEQQ
NLVADLEQDLSRSRTELSQRESKINEILQTEASLRSEVDKQRKLAVLMKKRVENLLKEKE
RADSLSKEKDDLARENQALSKQLEDAKQWKKTADAADEQALKDKEKEKNTRIQGLEKITD
RLREELKQERSKRVKMQKTIGDSYGTVNHQRSKLSDEMDKHKQALKMLTDEVEKIRQTKG
SQTEGTSVDQLLSGTHLEDFAAAYLQAVDDFERVARNELGVSGAGDTSAPDGSLSASVVP
GPAATLPPPASLLTSIPAVGKAEEERRLVLSKITSETRKTGRKLVRPRITKPEEPLVDVE
MQDTDESTNSRKHLPPQNAENLDNATLSTQPPIRKRLSAASTSELQEETPAMDETCLDVA
QPVLKKSKHLEAPQEGGEDKSAGNVENSESLPTTEEHDAGDETQCLKEEASDIEKDETTL
SGEQVEEPSVVATNQAESQVDRTDIADDTFVGSNEVSTPDNESTFLVQQESEQLAMDERE
EGELIADPEDVGNLDSILSMGSPENLEPQTDDLAGTDEDLLLTPTDPGEMESSQLPDDDK
NDEVDATEELAESSDKLNDGGDQVAAETDQAVDTVTGVKPSSSPVDSSNSKEGGPGESAA
AETEEGKQVSPVNRSSRTINLNERARERASIRQAAMLSSTPTRGRGRVLRGRGGRSGRGG
RGPISGSQG
NT seq
6150 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgtttatatcggatgaggaatacgagcggtgctcgcaagatgccggtttggta
gcggtgaaagctgatgagtttattcgcgatttgtacaatcaactggaaaatgtgaaagca
caggctgatgctgcatctattacagctgaacagacttgttctgttcttgaacagaagtat
gtctcgctttcttcagagtactccgcgcttcaactgcagtactctcaacttaattcttcc
tttgaggagcgcctgtctgaactctctcaagcacaagccgagaaacagcaagctttcatc
caatctattggaaaggatggagatgtggaccggttatcaacagaggcttcagaactccgg
aaaacaaagaggcaattgatggaattggtagaacagaaagacttggagattagtgagaaa
aattccactatcaaaagctatcttgataagatagttcactcgactgatattgctgcaaat
agggaagtacgggtctgtgacttggagactgaagtgtcacgctgtcaggcttcttgttcg
cggcttttgcaggagaaggagcttgttgagaggcataatgcatggcttaatgacgagtta
acaacaaaggtcaatggtctcatggagctgcgtaaagctcattctgagcttgaggctgat
atgtctgccaaacttgctgatgccgagaaaaaaattattgaatgtgataggcgtttgaag
agaaaagaggaacaagttagagaaatggagttgaagttcacttctctagagcaagattta
ttatcctccaaggatgtagcagctgcaaaagaggaccaaatgtctggtgaaattgcaacg
ttaaacaagctagtggagttgtacaaggagagctccgaggaatggtctaaaaaggcagga
gaacttgaaggagtaattaaagctctggagactcatggaaaccaaatagagaatgactat
aaagagaggctcgagaaagaagtatctgcaaagatagaactaaaggaggaggttgcatgt
ttgaaaaataagcttgcgaaaagcgaagcagaattaaaaaaaggagaagatacattgaag
cttcttcctttgagttatttttctagtgaatcattgccaaactcagttgaagctggtgac
atggttgaggatgatcggatggtcgtacctagtctgccaattggtgtttcaggaaccgca
ttagccgcttcacttcttcgggagggttggagtctgtctaagatgtacaccaaatatcag
gaaactgtcgatgcactacgacatgaacaattgggaagaaaacaagctcaagatgtactg
gagcgagtactctgtgaaatagaggagaaagctggagttatcttggatgagcgagcggag
catgaaagattggaagatgcttactctgtgctaaatgaaaagctgcagcattccctctct
cagcaagctgctttagagaggaatattcaggaattcaatgctgatatgagaaggcgtgac
cgtgattatgctgttgctcaggcagaggtagttgacctccaagaacaggtgacagtgctt
ttaaaggaatgccgtgatatacaattccgtggtggatctgtgggacctaaaaatgacaat
tctgtggtgtcaaattctttaattatgtttggtgctgaatctaatgctgatgatgttgga
aggcacttgagctacaaggacattaatggcctggttgaacaaaatgtccagctaagaggc
ctagttcggagccttactgaccagattgagaacagagagtcagagttgaaggaaaagtat
gagaaggagcttcagaagcatgttgacaaagctacctcccaggttaatgcagtactggca
aaagcggatgaacagggtacgatgattaaatcactccatgcatctgtggcgatgtacaga
aagctctttgaagagcatacagttgtttcttctgatactcgatctgaaaaagtagcagag
gttgagaggcaggaagtgatgcttttgcctgattcttcacatgaagttttagggagagca
caagaacgggcttttgagcgtgtaaaatgtcttgaagaagagttgtcaagattacggagc
gagattatttctcttcggtcagagcgggataagtcagctctggaagcacagtttgctcga
gataaacttgacagatatatgaaagattttgagctccagagagaggagcataatggtgtg
atcacgagaaatgttgagttctcacaattgatagttgactaccagaagaagctgcgagaa
agttatgagtcattgaatgctgctgaggaactttctcaaaagctaaaactggaggtgtct
attctaaaggatgaaaagggtatgctggtaaatgccgaaaagagagcttcggatgaagta
cgtaatttgtcacaaagggtgcatagtttgcaggtccatttagatacactgcagagtact
gagaacgttcgtgacgaggcaagagctgctgagaggagaaagcaagaagagtatatcaag
cttattgagaaagaatgggctgaagctaagaaagaattgcaagaacagcgtgataatgtt
cgaaaccttatacctgagcgagaagatgctctaaagaatgcattgagacaaattgaggaa
atgaggaaggaattggctagcacttcacattctgtggctgctgctgaagctagagttgtg
gttgctgaagcgcgatctgctgatttagaggaaaaattgcaagctttgcaaaaaaaggtt
cctgaaagagctgatgaaggtggtccttcctcttctactgaactttttgacaacatggat
tctgctgaagaagttaaaagactcggagaggaggtgcaggttaacaaaaatcatatgctg
caatataaaagcatagctcaggcaaatgaagaagcattaaagcagatggaattggcctat
gagaacctcaaagtagaagctgatagagtgaaaaaatcaatggaagaggaagtattatcg
cttaggaagcatgttgatgagcttgagagagaatgtaatttgaagtcaattgaagcagct
tctgcaactgcaggaaaagaagaagccgttgttgctgctttagctgaaatatccagtctg
aaagaagatacctctgctaagacgacacaaatctcaaatttggaggctcaaataactgct
ttgaaagatgatttagacaaagagcatcaaagatggcgtgctgctcaagataattatgag
agacaggtaattctgcagtcagaaacaattcaagaactgactagaacatctcaagctttg
gcaaccttacaagaagagtcatctgagctccgtaaattgtcagatattctaaaatcagaa
aataatgcattgaaggccaagtgggaggcagaattgtcggtgctagaagtgtcaaaaact
gaagctgagaagaaatacactgaggctaatgaacagaacaaaatattactggaccggctt
gagggtttgtatattaaactggctgagaaggaccgtgtatcttcaggtgtatctgctgga
agcacagtggccgagggtgacgacgggctgatgaatgttgtgaattatctaagacggtcc
aaggacattgcagaaacagaaatttctttgctcagacaggaaaaacttcggttgcaatca
cagcttgagaatgctctgaggagagtggaggtagcagaagcatcacttaattctgagcgg
gagaattcaagagctcaggttttaagtgaagaggagtttaaatcactgcagcttcaggtt
agagaattgaacttacttcgtgaaagcaacttgcaattgagagaggagaacaggcacaat
gttgaagaatgccagaaacttcgccaagctgcccagaagatgaaaactgaattagaggat
ctggagaagcttcttaatgaaagacaagctgatgtagaagcttgtaggaaagagattgaa
atgcagaagctggataaagagaagcttgagaggagggttagtgagttggttgagaggtat
aagagttttgacctagaagaatatgcaagtctgaaagaagctgcttcacagatgcaggtg
aatctgagagaaaaagatgtagaactggagaaaattaagaaagccatgtctgagcagcag
aatctggtagctgacttagagcaagacctttctaggagcagaacagaattgagtcagaga
gaatcgaaaatcaatgagattttgcaaactgaggcatcgctgagatctgaagttgataaa
caaagaaagttggcagttctaatgaagaaaagggttgaaaacttgttgaaggaaaaggaa
agggcagacagcttatcaaaggaaaaagatgatttggctagagagaatcaagctctctcc
aaacagttggaagatgctaaacaatggaaaaaaactgctgatgctgcagatgaacaggct
ttgaaagataaagaaaaggagaaaaacaccagaatccaggggcttgagaagatcacagac
cgtcttagagaagagttgaaacaagagagatcaaagcgcgtgaagatgcaaaagacaata
ggggattcctatggaactgtgaatcatcaacggtccaagctatcagatgaaatggacaag
cataagcaggctctgaagatgcttaccgatgaagttgagaagataaggcaaaccaaaggc
agtcaaacagagggcacgtcagtggatcaactactttctgggactcacttagaggatttt
gctgctgcatatcttcaggctgtagatgactttgaacgggttgcacgtaatgagctcggg
gtttctggtgctggtgacacttctgctccagatggttctctttctgcctctgttgttcca
ggcccagcagctacgcttccgccaccagctagcttgttgacttccattcctgcagttgga
aaagcagaagaagaaagaagacttgttttatcgaagataacctccgaaactcgtaaaacc
ggaaggaagttggttcgacctcgcatcacaaagccagaggaacctttagttgatgtagag
atgcaagatacagatgaatccaccaacagtaggaaacatttgccacctcaaaatgcagaa
aatctagataatgccacattatcaactcaaccaccaattcgcaagcgcctatctgcagcc
tctacctcagagttacaagaagagactcctgccatggatgaaacctgcttagatgtggct
caacctgtgcttaagaagtccaaacatctagaggcacctcaagaaggtggtgaagataaa
tctgctggtaatgtagaaaattcagaatctctgcctactacggaggaacatgatgctgga
gatgaaacccaatgtttgaaagaggaagccagtgatattgagaaggatgagactacactt
tctggtgagcaggttgaagagccgtcagttgttgcaacaaatcaggctgagtcacaggtt
gatagaacagatattgcagatgatacttttgtcggttctaatgaagtgtctaccccagat
aatgaatcaacatttctggtgcaacaagagagtgagcagctagcgatggatgaaagggaa
gagggagagctaattgctgatcctgaagatgttggaaatcttgatagcattttatcaatg
gggagcccagaaaatttggaacctcagactgatgacttagctggtactgatgaagacctc
ttgcttactccaacagaccccggggagatggaatcttctcagctcccagatgatgataag
aatgatgaagttgatgcgacagaagagctagctgaaagttctgataagttgaatgatggt
ggtgaccaggttgctgcagaaactgatcaggctgtggatactgttactggtgtgaaacca
tcaagcagtccagttgatagtagcaattcaaaagaagggggtccgggtgaaagtgctgct
gctgaaacagaagaagggaaacaggtctcacctgtcaataggagctcaagaactataaac
ttaaatgagagggctagagaaagggcttctattaggcaggctgctatgctttcttctaca
ccgacaagaggccgtgggcgagttcttcgaggtcgcggtgggcgcagtggtcgtggtggt
cgcggtccaatctctggttcacagggttaa
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integrated database retrieval system