Solanum tuberosum (potato): 102596029
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Entry
102596029 CDS
T02981
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
102596029
Enzymes [BR:
sot01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
102596029
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Endotoxin_C
Motif
Other DBs
NCBI-GeneID:
102596029
NCBI-ProteinID:
XP_006338026
LinkDB
All DBs
Position
Un
AA seq
640 aa
AA seq
DB search
MTAPGVHLHLPDDHHVMMDNGILQVTLSVPDGIVTGITYNGVDNLLEVLNDETNRGYWDV
VWSSTGTTGTTGTFERLICTTHKVILETDDQIELSFSRTWDVSFQDELIPLNIDKRFIML
KGSSGFYSYAIYEHLEGWPGFNLDETRIAFKLRKDKFHYMAMADNRQRYMPLPDDRLPDR
GQPLAYPEAVLLVNPIEPEFKGEVDDKYQYSCEDNDLKVHGWICMDPSLGFWIIIPSDEF
RSGGPLKQNLTSHVGPTALSVFLSAHYAGEDLVPKFGQGEPWKKVFGPVFIYLNSVTSGE
DPITLWEDAKKQMLMEVQSWPYSFPASEDFPSSSQRGNISGRLLVLDRYFKDDKISASGA
YVGLAPPGEAGSWQRECKDYQFWTRADEEGNYVISNIRAGDYNLYAYVPGFIGDYKYDIK
ITITSGCSIEMDDLVFEPPRNGPTLWEIGIPDRSAREFYIPDPDPKYVNKLFINHPDRFR
QYGLWERYADLYPNGDIVFTIGESDYKKDWFFVQVTRKTDEKTYQGTTWQIKFKLDNVDQ
NEIYTLRLALASAAQAELQVRVNDSSSMNTPLFSSGVIGKDNAIARHGIHGLNWLFNVNL
QGTILIEGENTIYLTQANATSPFQGIMYDYIRLEGPPSHD
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgactgctccaggagtacatctacatcttcccgatgatcaccatgtgatgatggacaat
ggcattctccaagtgactttatcagtaccagatggcattgtaactggaattacatacaat
ggcgtcgataatttgcttgaggttctaaatgatgaaacaaacagaggatattgggacgtt
gtttggagttcgacaggaactacagggactactggaacatttgaaaggctcatatgcaca
acacataaggtcatattggaaacagatgatcaaatagagttgtccttctcaaggacatgg
gatgtgtcgttccaggacgagcttattcccctgaacatagacaaaaggtttataatgctt
aaaggttcctcggggttctattcttatgcaatttacgaacatttagagggatggcctggt
ttcaaccttgatgaaactaggattgcattcaagctcagaaaagacaagtttcattacatg
gctatggcagataacaggcagagatacatgcccttacctgatgacaggttaccggataga
gggcaaccacttgcttatccagaagcagtcctgcttgtcaatcccatcgagcctgagttc
aaaggcgaggttgatgacaagtatcagtactcatgtgaggacaacgatctcaaggtccat
ggatggatttgtatggatccatcactaggattctggataattattcccagtgacgaattt
cgatctggaggaccccttaaacaaaacctcacatctcatgttggtccaactgctctttct
gtgtttctcagtgctcattatgcaggagaagatttggttccaaagtttggacaaggggag
ccatggaaaaaagtctttggaccagtttttatatatctgaattctgtcacttcaggggag
gatcctataactctctgggaggatgctaaaaaacagatgctgatggaagttcaaagctgg
ccttacagttttccagcctctgaggattttccatcatcttctcaacgcggtaatattagt
ggaagattgttagtcctagacagatacttcaaagacgataagatatctgcttctggtgca
tatgttggtttagctccaccaggagaagctggttcctggcaaagagaatgcaaggactac
caattctggacaagagcagatgaggaaggcaattacgtcataagtaatatacgagcaggc
gactataacttgtatgcatatgtccctggattcattggagactacaagtacgatatcaaa
atcacaattacctcaggctgcagcattgagatggatgatcttgtctttgaacccccaaga
aatggacctacactctgggaaattggcattcctgatcgttctgctcgcgagttttacatt
cctgatcctgatccaaaatatgttaacaaactctttattaatcatcctgataggtttaga
cagtatgggctatgggagagatacgccgacttgtatccaaatggagatatagtctttaca
attggagagagtgactacaaaaaagattggttctttgttcaagtcactaggaaaactgat
gagaagacatatcaaggaacaacatggcaaataaagttcaaactcgacaatgttgatcaa
aatgaaatctatacactaagattggcacttgcatcagcagctcaagctgaactacaggtt
cgcgtcaatgatagttcaagcatgaatactcctctattttcaagtggagtgatagggaag
gataacgcgatagcaagacatggaattcatggactcaactggctgttcaatgtgaatttg
cagggtactatactaattgaaggggaaaatactatatatttgacacaagcaaatgcaact
agtccttttcaagggatcatgtatgattatattcgtttagaaggacctccttcccatgac
taa
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