Solanum tuberosum (potato): 102596412 Help Entry 102596412         CDS       T02981                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism sot  Solanum tuberosum (potato) Pathway sot03040   Spliceosome Brite KEGG Orthology (KO) [BR:sot00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     102596412  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:sot03019]     102596412    03041 Spliceosome [BR:sot03041]     102596412 Messenger RNA biogenesis [BR:sot03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      102596412 Spliceosome [BR:sot03041]  Complex B   Other components    Prp19-related factors     102596412  Complex C     102596412 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_PRP39_N TPR_14 Suf Mad3_BUB1_I TPR_15 ARM_TT21_C ARM_TT21 Imm5 Motif Other DBs NCBI-GeneID:  102596412 NCBI-ProteinID:  XP_006345465 UniProt:  M1A9C8 LinkDB All DBs Position Un AA seq 915 aa AA seqDB search MSIPRELYPTEDDLPYEEEILRNPFSLKQWWRYLVARADAPFTKRRVLYERALQALPGSY KIWHAYLRERLELVRNLPINHSLYQALNNTFERALVTMHKMPRIWIMYLVSLTQQKLVTR TRRTFDRALCALPVTQHDRIWEHYLVFVSQRGIPIETSLRVYRRYLKYDPSHIEDLLEFL LNSELWQEAAERLAGVLNDDRFYSIKGKTKHRLWLELCDLLTQHATEISGLNVDAIIRGG IKKFTDEVGRLWTSLADYYIRRKLVEKARDIFEEGMTTVVTVRDFSVIFDAYSQFEESML ALKMEEMSDSEVDEGSNGEVGAEEDVDEEDDRLNVAKLEKKLKEFWLNDDKDIDLRLARL EHLMDRRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTFTEAVRTIDPMKAVGKP HTLWVAFAKLYENHKDIANARVIFDKAVQVNYKTVDHLASVWCEWAEMELRHRNFKGALE LMRRATAEPTVEVKRRVAADGNEPVQIKLHKSLRLWLLFVDLEESLGSLESTRVVYERIL DLRIATPQIIINYAVLLEDHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKS KLERARELFEHAVEQTPADAVKPLYLQYAKLEEDYGLAKRAMRVYDQATKAVPANEKLSM YEIYIARAAEIFGVPRTREIYEQAIESGLPDKDVKVMCLKYAELEKSLGEIDRARALYKH SSQFADPRSDPDFWDKWHEFEVQHGNEDTFREMLRVKRSVSASYSQTHFILPEYLMQKDQ MQTLEEAKDVLKKAGVADDEMAALERQLAPPENDTKSKEQSRVVGFVSAGVVESNGQKVT ANNEDIELPEESDSEEDDDKVEIALKEVPDAVFGGLIRKRDEGDEAEDDSTAKNKDSDGP LGALERIKRRKQQAS NT seq 2748 nt NT seq  +upstreamnt  +downstreamnt atgtcaatcccgagggagctctaccccaccgaagatgacctcccgtacgaggaagagatc ctcagaaatccgttcagcctgaagcagtggtggcgctatctagtggcacgagcagatgcg ccattcacaaaacgaagagtgctttacgaacgagccctacaagctctccccggaagctac aaaatatggcacgcgtatctccgcgaacgtctggagttagttcggaatcttccaatcaac cactccctgtaccaagctctgaacaacactttcgagagagcgcttgttacaatgcacaaa atgccacggatttggatcatgtacttggtgagtttaactcaacagaagctcgttactcga actagacgcactttcgatagagcattgtgtgcattacctgttactcagcatgataggatt tgggaacattatttagtgtttgttagtcaaaggggaattcctattgaaacatcacttagg gtttataggaggtacttgaagtatgacccttcccatattgaggatttgcttgagtttttg ttgaattctgagctgtggcaggaggcggcagagaggttagctggtgtattaaatgatgat cggttttattctattaaagggaagactaaacataggctttggttggagctgtgtgacttg ttaacacagcatgctactgaaatatcaggtttgaatgtggatgccataattagaggaggg attaagaagtttaccgatgaggttgggaggctttggacgtcgttggcggattattacatt aggaggaagttggtcgagaaggcgagagatattttcgaagaagggatgacaactgtggtg actgttagggattttagtgttatctttgatgcgtactcccagtttgaggagagtatgctt gccttgaaaatggaggagatgagtgatagtgaggtggatgaagggagtaatggtgaggtt ggggcagaggaagatgtggatgaggaggatgataggttgaatgtggcaaaattggagaag aagcttaaagagttttggctaaatgatgataaggatattgacttgagattagcgaggcta gaacatcttatggataggaggccagagcttgcgaatagtgtccttttgaggcaaaatccg cataatgtagaacagtggcatagaagggtaaaactattcgaagggaatccgacaaagcaa atattaacgttcactgaggcagttagaactattgacccaatgaaagctgtggggaagcca catactttgtgggttgcatttgcaaaactttatgaaaaccataaggatattgcaaatgca agagtcatctttgataaggcagtgcaggtgaattataaaactgttgatcatctggctagt gtttggtgtgaatgggccgagatggaactacgtcacaggaatttcaagggtgctctagaa ctgatgagacgtgccactgctgaaccaactgttgaggtcaaacggagagttgctgctgat ggaaatgaaccagtgcaaattaagctacacaaatctctaaggctttggttactgtttgtg gatttggaggagagtctaggaagcttagagtcaactcgtgtggtctatgagcgaattttg gatctgagaattgctacaccacagattataataaattatgcagtacttctggaggatcac aagtactttgaggatgcattcaaggtttacgagaggggtgtgaagatcttcaagtaccca catgttaaggatatatgggttacctatctttccaaatttgtgaagagatatgggaagtca aagttggaacgagctagagagttatttgagcatgctgttgaacagacccctgctgatgct gtgaagccattgtatcttcaatatgctaaattagaggaagactatggtcttgcgaagcgg gcaatgagggtttatgatcaagctacaaaagctgttccagcaaatgagaaattgagcatg tacgagatctatatagctcgtgcagctgagatatttggtgttccaagaacacgggagata tatgaacaagcaattgagtctgggcttccagacaaggacgtgaaagttatgtgcttaaag tatgctgaacttgagaagagcctaggggagattgatcgtgctcgtgcactatacaagcac tcatcacaattcgcagaccctagatctgaccctgatttctgggacaagtggcatgagttt gaggtgcagcatggtaacgaggataccttccgcgagatgctccgtgtgaagaggagtgta tctgcaagctacagccagacacattttatcctaccggagtatctcatgcaaaaggatcag atgcagacccttgaggaagcaaaggacgttttgaaaaaagctggtgttgctgatgatgag atggcagctcttgagaggcagttagcgccccctgaaaatgatacaaagagcaaagaacag agtcgggtagttggatttgttagtgcaggagtagttgagtcaaatggacagaaagtcact gcaaacaatgaggatattgagctacctgaggaaagtgattctgaagaggatgatgataag gttgaaattgcactgaaagaagtccctgatgcagtgtttggaggtctaatccgtaagagg gacgaaggtgatgaagcagaagatgactctactgccaagaataaagatagtgatggccct cttggcgcgctagaaagaataaaacgaaggaaacaacaagcatcttag

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