Solanum tuberosum (potato): 102596503
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Entry
102596503 CDS
T02981
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03013
Nucleocytoplasmic transport
sot03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102596503
03015 mRNA surveillance pathway
102596503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102596503
03041 Spliceosome [BR:
sot03041
]
102596503
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102596503
Spliceosome [BR:
sot03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
102596503
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
102596503
NCBI-ProteinID:
XP_006362050
UniProt:
M1CPI4
LinkDB
All DBs
Position
Un
AA seq
882 aa
AA seq
DB search
MSGGFFRGTSAEQDTRFSNKQAKLLKSQKFAPELEHLVDMTKVKMDVMKPWIAKRVTELI
GFEDEVLINFIYSLLERKVANGKELQISLTGFMERNTGKFMKELWALLLSAQNNASGVPQ
QFLEAKEEEMRNKKAEMDRIANEIQKKKERENRELDQEKRKKMDDYDSNLRQKNASREPT
PKQQLQVRLMDDLDPVERNGSRVRNRVSKSPRSADHSLSPRKSRSISKSFSNSRSYSGER
HRSRSTSGSLEERRCRSVSSERAYRSAPKCSVSPRRKHSPRQSHSPPRHRRRSTSRVRRR
SPSPARYRRHSPFRRRSRSPLRRRSRSPLRHRSRSPIWRRSRSPIWCRSRSPSRRSPVRY
ISRSPIKRRSPLRRRTPSPTQRRSPSPVSRGYHRSPLSPRQSSPFLVQRKPSISGRKRSL
TPARRFLSSQESLSPSPIYRRSPSPIRKRISKNERSPVQSLRGRIRSREKYSSVRYASPV
KTEAHKGSRSLERRRPTSSGSPQKRIYDRKDSREKELPLPPQLSRSPSVPESPRRSRSDS
ESPPTKRGRSPSEDRGPRSTLNRREIKTSDFDSLSPSKLREQKVSSDISEKITDQKEMNH
SREAFEHKPRSSRKIPTTPDPYKDLGKGFVEKEFSDIHSRSDRLESRKRNEAIKSEKFSG
TMEHTKELDKQKSPSTHRHSHSVKRLKESYDGESVKADKENLSHTNDTKGKELHVESEAP
LTSSKKVEQNDLSSNEGSGFEESEKRRAKIKDKRKHKRSDRYESTSDDSSDSDVEDRKEA
KKRRKEERRLKKEEKRRRREERRRRKEERRSQKLKSKSANAISSPSDTDRNPDNHASDDE
HLRKEGQHGREIEESESLQKRLEIELREKALESLRAKKGVSH
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggtttttttagggggacttctgctgagcaggacactcgcttctctaataag
caagctaagttgttaaaatctcagaagttcgctcctgaattggaacatctggtggacatg
acaaaggtcaagatggatgtaatgaaaccatggattgctaagcgagttactgagcttatt
ggtttcgaagatgaagtgcttatcaattttatttatagccttcttgaacgaaaggtagct
aatggcaaggagcttcaaatttcacttactggattcatggaaagaaacactggaaaattc
atgaaagagctttgggcattactacttagtgcacagaacaatgccagtggtgttcctcaa
cagttcctagaagccaaagaagaggaaatgagaaacaagaaggctgagatggatcgaatt
gcaaacgagattcagaagaaaaaggagagagagaacagggagctggatcaagagaaaagg
aagaagatggatgattatgacagcaatttgagacagaaaaatgcttcacgggagccaact
ccaaaacaacagcttcaagtgcgcttgatggatgatttagatcctgttgagagaaacgga
tcaagagtaagaaacagggtctctaaatccccacggtcagcagatcattcactctccccc
aggaaatcaaggtcaatcagcaagtcattctccaattcgaggagttactctggtgaaagg
cacaggtcacgaagtacatccggatctctagaagaaaggagatgtcgctctgtttcatct
gaaagggcatatcgctctgcaccaaagtgttctgtttcacctcgtaggaaacattcacct
cgacaatcccattctccaccaaggcataggcgaagatcaacctctcgagtacgtcgaagg
tcaccttctcctgcaagataccgaagacattctccattccgacgtagatcaaggtctccg
cttcgacgtagatcaaggtctccgcttcgacataggtcgaggtctcccatttggcgtaga
tcacgatcccctatatggtgtaggtcaaggtctccaagtagacgctcaccagtgcgatac
atatcaaggtcacctattaaacgtcgatcaccacttcgacgcagaacaccatctccaacg
caacgtaggtccccttctccagtgagtcgggggtaccaccgatctccattgagtcctcgg
caaagttctccattcctagttcaacgaaaaccctccatttctggtaggaagagatcctta
acccctgccagaaggtttctttcatctcaagaatcactttccccatcacccatttaccgc
aggtctccttcaccaatcagaaagagaatatcgaagaatgaaaggtcaccagttcaatct
cttcgaggaaggataaggagccgtgagaaatactcctctgttcgatatgcttcaccagta
aaaactgaggcccataaaggatccagatctttggaacgtagacgtcctacttcttctggg
tcaccacagaagaggatatatgaccgtaaggattcacgagaaaaagagctgcctttgccg
cctcagctaagccggtcaccatctgttccagaatctccacgtcgctctagatctgactca
gaatctccaccaaccaaaaggggaaggagtcctagtgaagatagagggccaaggagtact
ttgaaccggagggagataaagacaagtgacttcgacagccttagtccaagtaaattgaga
gagcagaaagttagttctgacatttctgagaaaatcacagatcagaaagaaatgaaccat
tcaagggaggcttttgagcataaacctaggtcttcaagaaaaattcccacaacacccgat
ccatataaagatcttgggaaggggtttgtcgagaaagaattttcagacattcatagccgt
tcagatcgattggagtcgagaaagcgaaatgaagcgattaagagtgaaaaattttcagga
actatggagcacacaaaggaactggataaacaaaagtcaccatcaactcatagacactct
cattcagttaaaaggttaaaggaatcatatgatggggagagtgtcaaagcagataaggaa
aacctgtctcacacaaacgataccaagggcaaagagctacatgttgagtccgaagctccc
ctcacttcatcaaagaaagttgagcagaatgatttaagtagtaatgagggttctggtttc
gaggaaagtgaaaagcgtagagctaaaattaaggataaaagaaagcataagaggtctgac
agatatgagtcaacgtcagatgatagttctgattctgatgttgaggataggaaggaggct
aaaaagagaaggaaagaggagagaagattgaagaaagaggagaagcgtcgccggcgggag
gagaggcggcgcagaaaggaagaaagacgttcccagaaactaaaatcgaagtcagctaat
gccatatcctcgccttcagatacagataggaatcctgataatcatgcttctgatgatgaa
catctgaggaaagagggtcaacatggacgtgagattgaggagtcagagtccttgcagaaa
agacttgagattgagctacgggagaaggctctcgagtctcttagagcaaaaaagggtgtc
agtcattaa
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