Solanum tuberosum (potato): 102596617
Help
Entry
102596617 CDS
T02981
Name
(RefSeq) non-canonical poly(A) RNA polymerase PAPD5
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102596617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102596617
03016 Transfer RNA biogenesis [BR:
sot03016
]
102596617
Enzymes [BR:
sot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
102596617
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
102596617
Transfer RNA biogenesis [BR:
sot03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
102596617
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
PAP_NTPase
TUTase
Polbeta
Nrap_D2
DUF1010
Motif
Other DBs
NCBI-GeneID:
102596617
NCBI-ProteinID:
XP_006362956
UniProt:
M1CCD4
LinkDB
All DBs
Position
Un
AA seq
521 aa
AA seq
DB search
MEVDGILYETLRPLSAAGTTTTATDDFPPSLSSSDEHEPYVVFRNQISLSTIQCPSPETA
APDYFSLDLDGDAADLNTSSVSTPVPAATPLPDKEVERGLEGNWFRANCRFKSPMLQLHQ
EIIDFCEFLSPTLEEQASRNEAIECVFNVIKYIWPNCKPEVFGSFKTGLYLPTSDVDLVI
LGSEIRSPQIGLQALSRALSQKGVAKKIQVISKARVPIIKFVEKKSGISFDISFDVENGP
KAAEFIKDAMSSWPPLRPLCLILKVFLQQRELNEVYTGGIGSYALLVMLIAMLQNHRNGQ
ASAEENLGILLVNFFDIYGRKLNTSDVGVSCNGEGTFFLKSRKGFSIKGKQSLISIEDPQ
TPENDIGKSSFNYFQVRSAFSMAFTTLTNAKAIFALGSNKSILGTIIRPDEVLVERKGGS
NGEVTFNNLLPGAGEGLQQYGDQQEIYCNWQLNDDEEALPRGNGIAEDGDAQSSGKKRKS
SKDKQPAKKVKENGHSSSVRDEENSSRKEKSSKKHWKHNRW
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggaagttgatggcattttgtacgaaactctccgcccactctccgccgccggcaccacc
accaccgccaccgacgactttcctccgtcgttgtcgtcctccgacgaacatgaaccctac
gttgtattccggaaccagatttcactatcaactatccagtgtccctcaccggaaactgcc
gcgcctgattacttttcactcgacctcgatggagacgccgccgacctgaataccagctct
gtttcgacaccggtaccagctgctactcctttgccggataaggaagtagagagaggactt
gaaggcaattggtttcgtgctaattgtcggtttaagagtcccatgctccagcttcaccaa
gagataatagatttttgtgagtttttatcacctacactggaggagcaagcatctcgtaat
gaagcaatagaatgtgtttttaatgttattaaatatatctggcccaactgcaagccagag
gttttcggatcattcaagacagggctttatcttcccactagtgatgttgatctggtgatt
ttagggtcagaaattagaagtcctcaaattgggttacaagctctttccagagctctctca
cagaaaggagttgcgaagaagatacaggtgatttcaaaggctcgtgtgccaataataaaa
tttgtggagaagaaaagtggcatttcatttgacataagctttgatgtggaaaatggaccc
aaagctgctgaatttattaaggatgccatgtctagctggccccctctgcgaccattatgc
ttgattttgaaagtgttcttgcaacagagagagttaaatgaggtttatactggtgggatt
ggatcctatgcattgcttgtaatgctcatagcaatgttgcagaatcatcgaaatggtcaa
gcttctgcggaggagaatttgggaattcttttggttaatttctttgatatttatggacgc
aaactaaatacatcagatgttggtgtatcttgtaatggtgaaggtaccttcttcctgaag
agtaggaaagggttctcaattaaaggaaagcaatctcttatctccattgaggatccacag
acaccagaaaatgacataggcaagagctccttcaattattttcaggtcagatctgctttt
tcaatggctttcacgacattgacaaatgcaaaagccatatttgcccttggttccaacaag
agtattcttggcacaataattagaccagatgaagtactagtggaaaggaaaggaggatct
aatggggaagtgacttttaataacttgctcccaggcgctggggagggactgcagcagtat
ggtgaccagcaggagatctactgtaactggcaattaaatgatgacgaagaagcactcccc
cgaggaaatgggattgcagaggacggtgatgctcaatcctcaggaaagaagaggaagtcg
tcaaaggataaacagcctgctaagaaggtgaaggaaaacgggcatagcagtagtgtcaga
gatgaagaaaattcatcgaggaaagagaagagttcgaagaagcattggaaacataataga
tggtga
DBGET
integrated database retrieval system
