Solanum tuberosum (potato): 102596754
Help
Entry
102596754 CDS
T02981
Name
(RefSeq) SWI/SNF complex subunit SWI3A
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102596754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sot03021
]
102596754
03036 Chromosome and associated proteins [BR:
sot03036
]
102596754
Transcription machinery [BR:
sot03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102596754
Chromosome and associated proteins [BR:
sot03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102596754
PBAF complex
102596754
GBAF(ncBAF) complex
102596754
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
UPF0167
DUF919
Motif
Other DBs
NCBI-GeneID:
102596754
NCBI-ProteinID:
XP_006347622
LinkDB
All DBs
Position
Un
AA seq
573 aa
AA seq
DB search
MDTSRLYKSSNEPTHDLYTIPSYTSWFSWQSIHEVERLSLREFFDGSSISRTPRIYKEYR
DYMITSYREDPTRRLSFSDIRKWLVGDISVLHKVFTFLEKWGLINFDPSNAETPAAIDAP
AEVDKEDEKWRIRVEEGAPHGVRVVAAPHSLKPLAPVPSPVIIGDRGGGRGRGGGTVDNI
LKFSPMASYLDVYGELVEQQKKESVVCVSCKEQCASGHYEYIKDASSNLCEKCFKSGNYD
KSKFADEFKFMDGANPKANWTEAETLLLLESVLKHGDDWDLVTQNVKTKSKLDCISKLIQ
LPFGDLMLGSIHKKLNFLDKNCEVRGVDQAQPAISESRETPGNQSHEQNQERQQNGNAEC
ETPPLKKIRRAPISEDSSFLMKQVGHISGAVGPHITASAAEAAVTALCYENQCSTDIFDG
DDNGLGSIADISETERTSQVVGAQGEEKHARSETEVEVSQRNSISLTLRMRAATATAIGA
AAAHAKLLANQEEREIEYLVSTLVEAQAKKLKRKMKHVEALNLMMEKQHGQMKDLEESLV
TERMDILQKIFNSGVSRWRDHASVKSQSSTSSI
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggacacatctcgcttgtataaatcctccaatgaacccactcacgacctttatacaatc
cctagttacaccagttggttttcttggcaaagcatacatgaggtggaaaggctttcattg
cgagaattctttgatggcagttcgatttcaaggacacccagaatctacaaagagtacagg
gactacatgattacctcataccgtgaggatccgactcgaaggctttcgttttcggatatc
cggaagtggttggtgggtgatataagtgtgctacacaaggtgtttacctttttggagaag
tggggtttgattaattttgaccctagtaatgctgaaacgccggctgctattgacgcacca
gcggaagtggataaggaggatgagaagtggaggattagggttgaagaaggggccccacat
ggggttagggttgtggcagctcctcattctttgaaaccccttgccccggttccttcaccg
gttatcataggggacagaggtggtggaagggggaggggtggtggtacggtggataatata
ctaaagttttcgcctatggcatcgtatttggatgtttatggggagttggtggagcagcag
aagaaggaaagtgtagtctgtgtgagttgtaaagaacagtgtgcttcgggtcattatgag
tacatcaaggatgcgagctcgaatttatgcgagaagtgttttaaaagtggtaattatgac
aagagcaaatttgcagatgaattcaagttcatggatggtgcgaacccaaaagccaactgg
acggaagccgaaactttactcctattagaatctgtactgaagcatggtgatgactgggat
cttgttactcaaaatgtcaaaacaaagagtaagctggattgtatctccaagcttatacag
ttgccatttggggatcttatgcttggttctattcataaaaagcttaattttttggacaag
aattgtgaggtaaggggcgtggatcaagctcaacctgcaataagtgagtctcgagaaact
cctggaaatcaatctcatgagcagaaccaggagcgtcaacagaatggaaatgctgaatgc
gaaacccctcctctcaagaaaatacgcagggctccaatttcagaagacagtagtttcctg
atgaaacaggtaggtcacatttctggtgctgttggtccacatatcacagcatctgcagct
gaggctgctgttacagccctttgctatgagaatcagtgttcaacggacatttttgatgga
gatgataatggattgggatcaattgctgatatcagtgagacagagaggacaagtcaagtt
gtaggtgctcaaggggaagaaaagcacgccagatcagaaacagaagtggaagtctctcag
aggaatagtatatcactaactttacgtatgagggccgcaactgctactgctataggtgct
gctgctgctcatgccaaattgttggccaatcaggaagagagagaaatagaatatctggtt
tctactttggttgaagcacaggcgaagaagttgaaacgcaaaatgaagcatgttgaagct
ctgaacctgatgatggagaagcagcatggccaaatgaaggatctagaagagtctttagtt
acggagagaatggacatcttgcagaagatatttaattccggggtatctagatggagggat
catgcttcggttaaatctcaaagcagcaccagcagcatataa
DBGET
integrated database retrieval system
