Solanum tuberosum (potato): 102596874
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Entry
102596874 CDS
T02981
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102596874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sot03021
]
102596874
03036 Chromosome and associated proteins [BR:
sot03036
]
102596874
Transcription machinery [BR:
sot03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102596874
Coactivators
SAGA/TFTC/STAGA complex
102596874
Chromosome and associated proteins [BR:
sot03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
102596874
STAGA complex
102596874
TFTC complex
102596874
SAGA complex
102596874
SLIK complex
102596874
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
CEP76_N
TAF4
Motif
Other DBs
NCBI-GeneID:
102596874
NCBI-ProteinID:
XP_006346177
UniProt:
M1C106
LinkDB
All DBs
Position
Un
AA seq
546 aa
AA seq
DB search
MSTVPEEAIEVISQSIGISNLSPDVLPALAADVEYRIREIMQEAIKCMRHSKRTTLSTDD
VDSALTLRNVEPIYGFASGDPLRFRRAAGHKDLFYIEEKDIEFKDVIEAPLPKAPLDTAL
FAHWLAIEGVQPAIPENPPLEALVLPPDNQKAEYKEDGVPVDLKVPVKHVLSRELQLYYD
KITELIMNKSNSPLFKEALASLATDPGLHPLVPYFTYFVADEVARNLNNFDLLFALMRLV
WSLLQNSHLHIEPYLHQSMPSVMTCLVAKRLGNKFADNHWELRDFTAKLIALICRRYGHV
YHSLQPRVTKTLLHAYLDPAKALPQHYGAIQGLAALGPGVVRLLVLPNLEAYLRLLEPEM
QFEKQKNEVKRHEAWRVYGALMCAAGLCMYEHFKMLPASLSPSNRTFLKSKLKVLTTLSN
KRKTSTDNMVSQPPTKKLVTDGPTPMLSDSLPADIQGATDGHDTVLAVTDGDLSSSPQDL
QNMNVTNVTRPSKREITGEQSQKTSTALGQVLKKDMDAANLLPQLFDYFGESMLFFAPTP
ELSFFL
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagtgccggaagaggcaatcgaagtgatatcacagagtatcggaataagcaat
ttatcaccggatgtcttgccagctctcgccgccgacgtcgagtaccgtattcgggaaatt
atgcaggaggctataaaatgtatgcgccattcgaagagaactactttatctactgatgat
gttgattctgcactcaccttgagaaatgtagagccaatatatggttttgcttcgggagat
cccttacggttcaggagagctgctgggcataaggatttgttctatattgaagagaaggat
atagaattcaaagatgtgatcgaagcacctctgccgaaagcaccactagatactgctctt
tttgctcactggttagctatagaaggggtacagcctgctattcctgaaaaccctccactt
gaagcacttgttctacctcctgataaccaaaaggcagagtataaggaggatggagttcct
gttgatcttaaagtacctgttaagcatgtcttatcccgtgagcttcagctttattatgac
aagattacagagcttatcatgaataaatccaactcccctctcttcaaagaagctttagca
agcttagcaacagaccctgggctccatcccttagttccttacttcacatattttgttgct
gatgaggttgcacggaatttgaataattttgatctcctttttgctttgatgaggctagtc
tggagccttcttcagaattctcatttacatattgaaccatatctgcaccagtcgatgccg
tctgtaatgacatgccttgttgcgaaaaggctggggaataaattcgctgacaaccattgg
gaactaagggacttcacagcaaagttgattgctttaatatgcaggcgatatggtcatgtc
tatcacagtctccagccacgtgtcacgaagactttgctgcatgcttatcttgatccagct
aaggcactgccacagcattatggagcaattcaagggctagcagctcttggacctggtgtg
gttcgcctgcttgtgctgccaaatcttgaagcttatttgcgattgttggagcctgaaatg
cagtttgagaaacaaaaaaatgaagtgaagagacatgaagcttggcgcgtatatggggcc
ttaatgtgcgctgcgggtctatgcatgtatgagcatttcaagatgcttcctgcatctcta
tctccatcaaatcggacattcctgaagagtaaattgaaagtcttgactacattgtcgaac
aaacgcaaaaccagcacggacaacatggtctcacagccgccaaccaagaaattagtgaca
gatggtcctacaccaatgctgtcagattctttgccagcagacatacaaggagctaccgat
ggacatgacacagtgctggctgttacagatggggatttatcatcaagtccacaagatttg
caaaatatgaatgtgaccaatgtgacgagacccagcaaaagggagattactggcgagcaa
agccaaaaaacatcaactgctcttggtcaggtcttgaagaaggatatggatgctgcaaat
ttattgccacaactatttgattattttggtgaaagtatgttgttctttgcacctacccct
gaattgtcattctttttgtga
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