Solanum tuberosum (potato): 102597325
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Entry
102597325 CDS
T02981
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102597325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102597325
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
102597325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
102597325
NCBI-ProteinID:
XP_006353312
LinkDB
All DBs
Position
Un
AA seq
200 aa
AA seq
DB search
MVTSSVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYTKEGMRTSVEGILLVQEHN
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSPGIQPNWQIGECVAIWW
RPNFETIMYPYCPPHITKPKECKKLFVVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
PVISTIPQQLSRFQFNMIHS
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggtaacgtcttcggttgtcaacacatacccactgtccagctatacatttggtactaag
gagcccaaaatggagaaggacacctccgtcgccgatcgccttgctcgtatgaaagtcaac
tatacgaaggagggcatgaggactagcgtcgaaggaattctattggtacaagaacacaat
catcctcacattcttctattgcaaattgggaacacattctgcaaacttccaggtggacgc
ttgaaaccaggagagaatgaaatcgagggtttgaaaaggaaactgtctagtaaacttgca
gctaattctcctggcattcagccaaattggcagataggtgagtgtgtggccatctggtgg
aggccaaattttgaaaccataatgtatccatattgccctccacacataacaaaacccaag
gagtgtaagaagctcttcgtagttcatctatctgaaagagagtactttgctgtcccaaaa
aatctgaagcttcttgcagtgccattgtttgaactttatgacaatgttcagagatatgga
cctgtgatatccacgattcctcaacagctttccagattccagttcaacatgatccactcg
tag
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