Solanum tuberosum (potato): 102597582
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Entry
102597582 CDS
T02981
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sot03041
]
102597582
Enzymes [BR:
sot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102597582
Spliceosome [BR:
sot03041
]
Complex C
Other components
Complex C specific factors
102597582
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
HA2_N
AAA_19
AAA_30
ResIII
AAA_7
AAA_11
AAA_29
nSTAND3
AAA_16
AAA_23
Motif
Other DBs
NCBI-GeneID:
102597582
NCBI-ProteinID:
XP_006358785
UniProt:
M1BIR6
LinkDB
All DBs
Position
Un
AA seq
690 aa
AA seq
DB search
MSQFWKPGTERPRLVDDEEGGILLYTASSSSSSGFGYGSLEKQRQRLPVYKYKTAILYSV
ETHATTIIVGETGSGKTTQIPQYLKEAGWAEGGRMIACTQPRRLAVQAVATRVAEEMDVK
LGEEVGYTIRFEDITNEELTRVKFLTDGVLLREMMDDPLLSKYSVIMVDEAHERSLSTDI
LLGLLKKIQRRRPELRIIISSATIEAKSMAAFFNTRRRREEEQGPTKEPAILSVEGRGFN
VEIFYVDDPVSDYVRSAVSTVMSIHDQERMGDILVFLTGQDDIDTAIQLLTEEAQSSGKQ
GLVSVPLYSGLPRADQDLVFSPTPRGKRKVIFSTNIAETSLTLEGIVYVVDSGFSKQRFY
NPISDIENLVVAPISKASARQRAGRAGRVRPGKCFRLYTEDYFSNEMSVVGIPEIQRSNL
VSCVIQLKALGIDNILGFDWPASPSPESMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIP
LDPLISKMILASCEFGCSEEIITIAAVLSIQSIWIPVRGVQKQLDEAKLRFAAAEGDHVT
FLNVYKGFIQSNKSSKWCHKNFINYHAMRKVIEVREQLKRITQRLGIGLKSCEGDIQAVK
KAITAGFFANAARLEPFSHNGMYKTLRTSQEVYIHPSSVLFRVNPKFIVYHSLVSTDRQY
MRNVITIDPSWLTEAAPHFYQKQLHSSIPQ
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaattttggaaaccaggaactgaacggccccgtcttgtagatgatgaagagggt
ggcattcttctctacactgcatcttcttcctcatcctctggatttgggtatgggagttta
gagaagcaaagacagaggttgcctgtgtacaagtacaaaactgctattctttactcagtg
gagactcatgctactaccattattgttggagaaactggaagtggaaaaaccactcaaatt
cctcagtacctgaaagaagctggttgggctgagggagggcgaatgattgcttgtacccaa
ccaaggagactggcagtccaggcagttgctacaagagttgccgaagaaatggatgttaaa
cttggtgaggaagttggttatactattcgatttgaagatatcacgaatgaggaattaact
agggtcaaatttcttactgatggggttttgctgagggaaatgatggatgatcctctattg
agcaagtatagtgtgattatggtagatgaagctcatgaaaggtctctctcgacggacatc
ttattgggactactgaaaaagattcaaaggcgtcggcctgagctgcgtattataatatca
tcagctacgattgaagcaaaatcaatggctgctttctttaatacaagaagacgacgggag
gaggagcaaggaccaacaaaagaacctgctattctgtcagttgagggtaggggatttaat
gtggagatattctatgttgatgatcctgtttctgattacgtccggtctgctgtttcaaca
gtgatgtcgatccatgaccaggagcggatgggagatatcctggtgtttctcactggtcaa
gatgatattgatactgcaatacaattgctcactgaagaagcccaaagtagtgggaagcaa
ggactggtttctgtgccactatactcgggacttcctcgagcagatcaggaccttgtgttt
tcccctactcccagaggaaagagaaaagtgatattttcaacaaatattgctgagacgtca
ttgactctagagggtattgtctatgttgttgatagcgggttctcaaaacaacgtttctac
aatccgatttcagatattgagaacttggtagtggcaccaatatcaaaggcatctgctcga
caaagggctggtagagctggaagagttcgaccaggaaagtgttttaggctctacacagaa
gattacttttccaatgagatgtctgtggtgggaatccccgagattcaaagatcaaacctc
gtttcctgtgtcatccagttgaaggccttgggcatcgataatattttaggttttgattgg
ccagcatctccatcacctgaatcgatgatcagagcacttgaagtactgtactcacttgga
gtactagatgacgacgccaagcttacttcacctactggatttcaagttgcagagattcca
ctggacccattaatatccaaaatgatcttagcttcttgtgagtttggatgttcggaggaa
ataattaccattgctgctgtgctctccatacagtctatttggattcctgttagaggagta
cagaagcagttggatgaagctaaattgagatttgcagctgccgagggtgaccatgtcaca
ttcttaaatgtgtataaaggattcattcagtctaataaatcttcgaagtggtgtcacaag
aattttataaattatcatgccatgagaaaagtaattgaagttagggaacagctgaaaagg
attacacaaaggttgggcataggattgaaatcttgtgaaggggatattcaggcagtaaag
aaggcaattacggcaggtttttttgccaatgctgcccgcttagaaccgttcagtcacaat
gggatgtacaagactctcagaacttctcaagaagtgtatattcatccttcatctgtgttg
ttcagggtcaatccgaagttcattgtgtaccattctctcgtttcaacagatcgtcagtac
atgcgaaatgtcatcactatcgatccttcttggctaacggaggctgcacctcatttttac
cagaagcagttgcatagttctattcctcaatga
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