Solanum tuberosum (potato): 102598086
Help
Entry
102598086 CDS
T02981
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102598086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sot03041
]
102598086
Spliceosome [BR:
sot03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
102598086
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_EML
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
PRP4
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_RIG_2nd
WD_LRWD1
eIF2A
Beta-prop_SCAP
Nbas_N
Beta-prop_SPT8
WD40_like
Motif
Other DBs
NCBI-GeneID:
102598086
NCBI-ProteinID:
XP_006358021
UniProt:
M1AYL0
LinkDB
All DBs
Position
Un
AA seq
583 aa
AA seq
DB search
MDAMDAMDAEDEVPVSTSEPSTLVDDNSTVVNAIGAVNLQPVPAVIPPVVPMVILPPVVP
AIAPRLAVPTPIPPPLAPLPVRPPVLRPPVAQNGEMQESDSDSDLEEMVSGRGAAGSTQE
YEISEESRIVRERQEKALQELLMKRRAAALAVPTNDMAVRARLRRLGEPITLFGEREMER
RDRLRMLMARLDAEGQLEKLMKAHEDEEAAASAAPAEEEDIQYPFYTEGSKALLDARVEI
AKYSLVKSALRLHRARRKRDDPDEDVDAEVDWALKQAGSLALDCSEIGDDRPLFGCSLSH
DGKMLATCSLSGIAKIWSMPQVQKVSTLKGHTERATDVAFSPTSNYLATASADKTARLWN
SEGSLLRTFEGHLDRLARIAFHPSGKYLGTASFDKTWRLWNVESGEELLLQEGHSRSVYG
LSFHHDGSLVASCGLDALVRVWDLRTGRSILALEGHVKPVLGVSFSPNGYHLASGGEDNT
CRIWDLRQRRSSYIIPAHSNLISQVKFEPQEGYFLATASYDMTAKVWSSRDFKPVKTLSG
HEAKIMSLDVAADGQFITTVSYDRTIKLWSSKNIEKEEKMDMD
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggatgctatggatgctatggatgctgaggatgaagttcctgtctcaacttcagaacct
tcaactctagttgatgataattcaactgtggttaatgctataggtgcagttaatcttcaa
ccagttccagctgtcattccaccagttgttccaatggttatccttcctcctgtcgtgcct
gcaattgctccaaggcttgcagttcctacccctattcctcccccattagctccgttgcct
gttcgtccacctgtccttaggcctccggtagctcagaatggagaaatgcaagagagtgat
tcagattcagaccttgaagaaatggtatccggtcgtggtgctgcgggctccacgcaagaa
tatgagatctctgaggagagtagaattgtccgagagaggcaggaaaaggcgctgcaggag
cttctcatgaagagacgtgctgctgcgctagcagttcctacaaatgatatggccgttcga
gctcgactgcgaaggcttggcgagccaataactctctttggagaaagggagatggaaaga
agggatcgactgcggatgcttatggcaaggcttgatgcagaagggcagctggaaaagctg
atgaaagctcatgaggatgaagaagctgcagcttctgctgcaccagcagaggaggaggat
attcaataccctttttacacagaaggatcaaaagcacttttagatgctagggtagaaatc
gcaaagtattctttagttaagtcggctttacgtctccatcgtgcaaggaggaaaagggat
gatccagatgaagatgtggatgcagaggttgattgggctttaaagcaagcagggagcctg
gcccttgattgcagtgaaattggagacgatcgacccctttttggatgctcgctttcacat
gatggaaagatgcttgcgacctgttctctgagtggtatagcaaaaatatggagtatgcct
caagtgcaaaaggtttccactctaaaaggtcacactgaacgagctactgatgttgcgttc
tctccgacaagcaattatttagctactgcatctgctgacaagaccgcaaggttatggaac
tcagaaggttctctcctcagaacttttgagggacatttggaccgtctagctcggattgct
tttcatccttccggaaaatacttgggcacagctagcttcgacaaaacttggagattatgg
aatgtggagagtggtgaagagctgcttttgcaagaaggtcacagtaggagtgtttatgga
ttgtcttttcaccatgatggttcattagtggcatcatgcgggttggatgcacttgttcga
gtgtgggatttaaggactgggcgaagtattcttgctctagaaggccacgttaaaccggtt
cttggtgtcagtttttcaccgaatggttatcatttggctagtggtggtgaagataatacc
tgtcgtatttgggacttaaggcagagaagatcttcttacatcataccagctcactccaat
cttatctctcaagttaagtttgagcctcaggagggatactttttggctacagcttcctat
gatatgactgctaaggtatggtcatcaagggatttcaagcctgtaaagacactctctggt
catgaagcaaaaatcatgtcattggatgttgcggcagatggacaattcattacaaccgtg
tcttatgatcgaacaatcaagctgtggtcaagcaaaaacattgagaaggaagagaaaatg
gatatggactag
DBGET
integrated database retrieval system
