Solanum tuberosum (potato): 102598328
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Entry
102598328 CDS
T02981
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102598328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sot04121
]
102598328
Enzymes [BR:
sot01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102598328
Ubiquitin system [BR:
sot04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
102598328
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
FAIM1
DZR
Motif
Other DBs
NCBI-GeneID:
102598328
NCBI-ProteinID:
XP_006360161
LinkDB
All DBs
Position
Un
AA seq
318 aa
AA seq
DB search
MEEMEMDSIECVSLMDGVEDEEIQSSVASHQYPLGKPNNILHAGNVPTSVHELLECPVCT
NSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYFSLG
CPEIFPYYSKLKHETLCNFRPYSCPYAGSECSVTGDIPFLVTHLRDDHKVDMHTGCTFNH
RYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGVAPVYMAFLRFMGDETDARNYSY
SLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRI
WKEQQNPDGGVCIPNLCS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaatggaaatggatagcattgagtgtgtatcattaatggatggtgttgaagat
gaagagatccaatcttctgttgcatctcatcaataccctttaggaaagcctaataacatt
cttcatgctggaaatgtgcctactagtgtacatgaattgcttgaatgccctgtttgtaca
aattctatgtacccaccaattcaccagtgtcacaatgggcacacactttgttctacctgc
aaaacaagggtgcacaatagatgtccgacatgcagacaagagcttggtgatataaggtgc
ttagcgttagagaaggttgcagagtcacttgaactgccttgcaaatatttttctttgggg
tgcccagaaatattcccatattacagcaaacttaagcatgaaacattgtgcaattttaga
ccgtacagttgcccatatgctgggtcagagtgctcagtgactggggacatcccttttttg
gttacgcatttaagagatgaccacaaagtggatatgcacacgggatgcacgttcaaccat
cgttatgtgaagtctaatcctcgtgaagtagaaaatgcaacatggatgttgacggtcttc
cattgttttgggcaatatttctgtctccattttgaggccttccagcttggtgtggcccct
gtttatatggcatttttacgattcatgggtgatgaaacggatgcacgtaattacagctac
agtctagaggtaggaggaaatggtagaaaactcatatgggagggtaccccaagaagtatc
cgagatagtcatcgcaaggtcagggacagtcatgatggtcttataatccagcgtaacatg
gcacttttcttttctggtggtgaccggaaagaactgaaacttcgagttactggaaggata
tggaaggaacaacaaaatccagatggtggtgtgtgcataccaaatctatgtagctag
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