Solanum tuberosum (potato): 102598472
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Entry
102598472 CDS
T02981
Name
(RefSeq) structure-specific endonuclease subunit SLX1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
102598472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sot03400
]
102598472
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102598472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GIY-YIG
DUF7032
DUF1681
DotU
Motif
Other DBs
NCBI-GeneID:
102598472
NCBI-ProteinID:
XP_006345391
UniProt:
M1A969
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All DBs
Position
Un
AA seq
221 aa
AA seq
DB search
MVRPLSTIFKSTKPHILKPPNPSNFESLKPTNLKVPSSSNPVASSSSCSKSKKSRKSDAN
SQQSSGNDPELLTSPASNSTKFSNSKKKRSLWCVYLILSTNPPIKTYVGVTTNFSRRLKE
HNGELKGGAKASRSGRPWICACLIRGFKGRSEACAFESKWKQISRKLPRKRKSTTEEQEQ
EQEPEDNGSLALLQHRHAALDRVQSLIDCSDLNIDWRSNFF
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggttagacctttgtcaacaatcttcaaatcgacgaaaccccatattctgaaaccacca
aacccctcaaattttgaatcgttgaagcccactaatctcaaagttccctcttcttcaaat
ccagtagcatcttcctcaagttgcagcaaatcgaagaaatcaagaaagtcggatgcaaat
tcacagcaatcatcaggaaatgatccggaattactaacaagcccagcttcaaattcaacg
aaatttagtaattctaagaaaaagaggtctttgtggtgtgtataccttattctctcgaca
aatccacctattaagacctatgttggtgtcactaccaatttctctcgccgactaaaagaa
cataatggtgaattaaaagggggtgcaaaggcatctcgctcaggaagaccttggatttgt
gcatgccttattcggggatttaagggcagaagtgaagcttgtgcatttgaatcaaaatgg
aaacaaatttcgagaaagcttccccgtaaaaggaagagtactactgaggagcaggagcag
gagcaggagccagaagacaatggatctcttgcattattgcagcatagacatgcagctctg
gatcgcgttcaaagtttgattgattgcagtgacttaaatattgattggcgttctaatttt
ttctga
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