Solanum tuberosum (potato): 102598532
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Entry
102598532 CDS
T02981
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
102598532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sot03400
]
102598532
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
102598532
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
DUF2465
Motif
Other DBs
NCBI-GeneID:
102598532
NCBI-ProteinID:
XP_006354733
UniProt:
M0ZY09
LinkDB
All DBs
Position
Un
AA seq
943 aa
AA seq
DB search
MDEKFEEQGKLPELKLDARQAQGFLSFFKTLPKDVRAVRLFDRRDYYTAHGDDATFIAKT
YYHTTTALRQLGNGVGALSSVSVSRNMFETIARDILLERMDRTLELYEGSGSNWKLVKSG
TPGNFGSFEDILFANNEMQDSPAIVALAPKFDQNGCTVGLGYVDITKRVLGLAEFLDDSH
FTNLESALVALGCRECLVPTETGKSSESRPLYDAISRCGVMVTERKKTEFKGRDLVQDLG
RLVKGSVEPVRDLVSSFECAAGALGCILSYAELLADESNYGNFTVKQYNLNSYMRLDSAA
MRALNVMESKSDANKIFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVDEINCRLDLVQAF
VEDAALRQDLRQHLKRISDIERLTHNLERKRASLLHVVKLYQSGIRIPYIKSVLERYDGQ
FAPLIRERYIDSLEKWSDDNHLNKFIALVETAVDLDQLENGEYMISSAYDSNLSALKDEQ
ETLEQQIHNLHKQTANDLDLPIDKSLKLDKGTQFGHVFRITKKEEPKVRRQLNSHYIVLE
TRKDGVKFTNTKLKKLGDRYQKILDEYKSCQKELVARVVQTVASFSEVFEGLAGSLSELD
VLLSFADLASSCPTAYSRPNISPPDTGDIILEGCRHPCVEAQDWVNFIPNDCRLVRGESW
FQIITGPNMGGKSTYIRQVGVNVLMAQVGSFVPCDNATISIRDCIFARVGAGDCQLKGVS
TFMQEMLETASILKGATNRSLIIIDELGRGTSTYDGFGLAWAICEHIVEEIKAPTLFATH
FHELTALANENGNNGHKQIAGVANFHVSAHIDSSSRKLTMLYKVQPGACDQSFGIHVAEF
ANFPQSVVALAREKASELEDFSPNAMMPTDSKKAVSKRKREFDPHDVSRGTARARQFLQD
FTQLPLDKMDLKQALQQLSQMKTDLEKNAVDSQWLQQFFSSSD
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaaatttgaggaacagggcaagcttcccgagcttaaacttgatgcgaggcaa
gctcaagggtttctttcattcttcaaaaccctacccaaggatgttagggcagttcgtctc
ttcgatcgtcgggactattatactgcccatggagatgatgcaactttcattgcaaagaca
tattaccataccacaactgctttacggcagttgggtaatggagttggtgctctttccagt
gttagtgtgagtagaaacatgtttgaaacaatagctcgtgatattctcttggagaggatg
gatcgtactcttgaattgtatgagggcagtggttcaaactggaaactggtcaaaagtgga
accccaggaaattttggaagttttgaggatattctgtttgctaataatgaaatgcaagat
tctccagcgattgttgctcttgcgccaaaatttgatcagaatggatgtacagttgggtta
ggttatgttgatattactaagagagtccttggtttagcagaatttctagatgatagccac
ttcaccaatttggagtctgctttggttgctcttggttgcagagaatgtcttgtaccaaca
gagactgggaaatccagtgagagcaggcctctatatgatgcaatatcgagatgcggggtg
atggtaactgaaagaaagaaaactgaatttaaaggtagggatttggtacaggatcttggt
aggcttgtcaagggttcagtagaacctgttcgagatctagtctctagttttgaatgtgca
gcaggtgctttggggtgcatactttcctatgcagaactacttgcggatgagagcaattat
ggaaacttcacagtcaaacaatacaacctcaatagttacatgagattagattctgctgct
atgagagcactgaatgttatggagagcaaatcagatgctaataaaatttttagcttgttt
ggtctcatgaatagaacctgtactgctggaatgggtaaaaggttattgcacatgtggctg
aaacagccgttactagatgtagatgagattaactgtagactggatttagttcaagcattt
gtggaggatgctgcacttcgccaagatttgaggcagcatctgaaaagaatttcagatatt
gagcggctgacacacaatcttgagaggaaaagagccagtttattgcacgttgtaaaactc
tatcagtcaggcatcagaataccatatatcaaaagtgttttggaacgttatgatgggcaa
tttgcaccactaatcagggaaaggtatattgattctcttgagaaatggagtgatgataat
catctgaataagttcattgctcttgtggagactgctgttgaccttgatcaacttgagaat
ggagaatacatgatttcttctgcatatgactcaaatttatctgctctgaaggatgagcaa
gagacattggagcaacagattcataatttgcacaaacaaactgccaatgatcttgatcta
cctattgataagtctcttaaattagataaaggaacacaatttggacatgtcttcagaatt
accaagaaagaagaaccaaaagtcaggagacagctaaattctcactacattgttcttgaa
acacgtaaggatggggtaaagttcaccaatacaaaactcaaaaaactaggagatcggtac
cagaagatcttagatgagtataagagctgtcagaaagaactggtagctcgggtagttcaa
acagttgcgagtttctccgaggtgtttgaaggtttagctggttcactttctgagttggat
gtgctactgagttttgcggatttggcttccagttgcccaactgcctactcaagaccaaat
atcagtccaccagatacgggagatattattcttgaagggtgtagacatccttgtgtggaa
gctcaagactgggtcaacttcatccctaatgactgtagactagttaggggagaaagttgg
tttcagattatcacaggccctaacatgggtggaaagtctacctacattcgtcaggttggt
gtgaatgtcctgatggcccaagttggctcatttgttccatgtgacaatgctaccatttct
attcgtgattgcatttttgctcgtgttggcgctggagattgccagctgaagggggtttct
acttttatgcaagagatgcttgagactgcatcgatcttgaaaggagctactaatagatca
ttgattataattgatgagttgggccgtgggacgtcgacttatgatggctttggtttagct
tgggctatttgtgagcacattgttgaagaaattaaagcaccaacattgtttgcaactcac
tttcacgagctgactgcattggccaatgagaatggaaacaatggacataagcaaattgcc
ggtgtggcaaattttcatgtcagtgcacacattgactcttctagtcgcaagctaactatg
ctttacaaggttcaacccggtgcttgtgatcaaagttttggtattcacgttgcagagttt
gccaattttccacaaagtgttgtggccctggccagagaaaaggcttctgagttggaggat
ttctctcctaatgctatgatgccaactgacagtaaaaaggcagtctcaaagcggaagagg
gaatttgacccacatgatgtgtctagaggtactgcccgagctcgtcaattcttacaggat
ttcactcagttgcctctggataagatggatctaaagcaggccttgcaacagttgagccaa
atgaagaccgaccttgagaagaatgcagttgacagtcagtggcttcagcagttctttagt
tcttcagattag
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