KEGG   Solanum tuberosum (potato): 102598532
Entry
102598532         CDS       T02981                                 
Name
(RefSeq) DNA mismatch repair protein MSH2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    102598532
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sot03400]
    102598532
DNA repair and recombination proteins [BR:sot03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     102598532
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II MutS_I DUF2465
Other DBs
NCBI-GeneID: 102598532
NCBI-ProteinID: XP_006354733
UniProt: M0ZY09
LinkDB
Position
Un
AA seq 943 aa
MDEKFEEQGKLPELKLDARQAQGFLSFFKTLPKDVRAVRLFDRRDYYTAHGDDATFIAKT
YYHTTTALRQLGNGVGALSSVSVSRNMFETIARDILLERMDRTLELYEGSGSNWKLVKSG
TPGNFGSFEDILFANNEMQDSPAIVALAPKFDQNGCTVGLGYVDITKRVLGLAEFLDDSH
FTNLESALVALGCRECLVPTETGKSSESRPLYDAISRCGVMVTERKKTEFKGRDLVQDLG
RLVKGSVEPVRDLVSSFECAAGALGCILSYAELLADESNYGNFTVKQYNLNSYMRLDSAA
MRALNVMESKSDANKIFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVDEINCRLDLVQAF
VEDAALRQDLRQHLKRISDIERLTHNLERKRASLLHVVKLYQSGIRIPYIKSVLERYDGQ
FAPLIRERYIDSLEKWSDDNHLNKFIALVETAVDLDQLENGEYMISSAYDSNLSALKDEQ
ETLEQQIHNLHKQTANDLDLPIDKSLKLDKGTQFGHVFRITKKEEPKVRRQLNSHYIVLE
TRKDGVKFTNTKLKKLGDRYQKILDEYKSCQKELVARVVQTVASFSEVFEGLAGSLSELD
VLLSFADLASSCPTAYSRPNISPPDTGDIILEGCRHPCVEAQDWVNFIPNDCRLVRGESW
FQIITGPNMGGKSTYIRQVGVNVLMAQVGSFVPCDNATISIRDCIFARVGAGDCQLKGVS
TFMQEMLETASILKGATNRSLIIIDELGRGTSTYDGFGLAWAICEHIVEEIKAPTLFATH
FHELTALANENGNNGHKQIAGVANFHVSAHIDSSSRKLTMLYKVQPGACDQSFGIHVAEF
ANFPQSVVALAREKASELEDFSPNAMMPTDSKKAVSKRKREFDPHDVSRGTARARQFLQD
FTQLPLDKMDLKQALQQLSQMKTDLEKNAVDSQWLQQFFSSSD
NT seq 2832 nt   +upstreamnt  +downstreamnt
atggatgaaaaatttgaggaacagggcaagcttcccgagcttaaacttgatgcgaggcaa
gctcaagggtttctttcattcttcaaaaccctacccaaggatgttagggcagttcgtctc
ttcgatcgtcgggactattatactgcccatggagatgatgcaactttcattgcaaagaca
tattaccataccacaactgctttacggcagttgggtaatggagttggtgctctttccagt
gttagtgtgagtagaaacatgtttgaaacaatagctcgtgatattctcttggagaggatg
gatcgtactcttgaattgtatgagggcagtggttcaaactggaaactggtcaaaagtgga
accccaggaaattttggaagttttgaggatattctgtttgctaataatgaaatgcaagat
tctccagcgattgttgctcttgcgccaaaatttgatcagaatggatgtacagttgggtta
ggttatgttgatattactaagagagtccttggtttagcagaatttctagatgatagccac
ttcaccaatttggagtctgctttggttgctcttggttgcagagaatgtcttgtaccaaca
gagactgggaaatccagtgagagcaggcctctatatgatgcaatatcgagatgcggggtg
atggtaactgaaagaaagaaaactgaatttaaaggtagggatttggtacaggatcttggt
aggcttgtcaagggttcagtagaacctgttcgagatctagtctctagttttgaatgtgca
gcaggtgctttggggtgcatactttcctatgcagaactacttgcggatgagagcaattat
ggaaacttcacagtcaaacaatacaacctcaatagttacatgagattagattctgctgct
atgagagcactgaatgttatggagagcaaatcagatgctaataaaatttttagcttgttt
ggtctcatgaatagaacctgtactgctggaatgggtaaaaggttattgcacatgtggctg
aaacagccgttactagatgtagatgagattaactgtagactggatttagttcaagcattt
gtggaggatgctgcacttcgccaagatttgaggcagcatctgaaaagaatttcagatatt
gagcggctgacacacaatcttgagaggaaaagagccagtttattgcacgttgtaaaactc
tatcagtcaggcatcagaataccatatatcaaaagtgttttggaacgttatgatgggcaa
tttgcaccactaatcagggaaaggtatattgattctcttgagaaatggagtgatgataat
catctgaataagttcattgctcttgtggagactgctgttgaccttgatcaacttgagaat
ggagaatacatgatttcttctgcatatgactcaaatttatctgctctgaaggatgagcaa
gagacattggagcaacagattcataatttgcacaaacaaactgccaatgatcttgatcta
cctattgataagtctcttaaattagataaaggaacacaatttggacatgtcttcagaatt
accaagaaagaagaaccaaaagtcaggagacagctaaattctcactacattgttcttgaa
acacgtaaggatggggtaaagttcaccaatacaaaactcaaaaaactaggagatcggtac
cagaagatcttagatgagtataagagctgtcagaaagaactggtagctcgggtagttcaa
acagttgcgagtttctccgaggtgtttgaaggtttagctggttcactttctgagttggat
gtgctactgagttttgcggatttggcttccagttgcccaactgcctactcaagaccaaat
atcagtccaccagatacgggagatattattcttgaagggtgtagacatccttgtgtggaa
gctcaagactgggtcaacttcatccctaatgactgtagactagttaggggagaaagttgg
tttcagattatcacaggccctaacatgggtggaaagtctacctacattcgtcaggttggt
gtgaatgtcctgatggcccaagttggctcatttgttccatgtgacaatgctaccatttct
attcgtgattgcatttttgctcgtgttggcgctggagattgccagctgaagggggtttct
acttttatgcaagagatgcttgagactgcatcgatcttgaaaggagctactaatagatca
ttgattataattgatgagttgggccgtgggacgtcgacttatgatggctttggtttagct
tgggctatttgtgagcacattgttgaagaaattaaagcaccaacattgtttgcaactcac
tttcacgagctgactgcattggccaatgagaatggaaacaatggacataagcaaattgcc
ggtgtggcaaattttcatgtcagtgcacacattgactcttctagtcgcaagctaactatg
ctttacaaggttcaacccggtgcttgtgatcaaagttttggtattcacgttgcagagttt
gccaattttccacaaagtgttgtggccctggccagagaaaaggcttctgagttggaggat
ttctctcctaatgctatgatgccaactgacagtaaaaaggcagtctcaaagcggaagagg
gaatttgacccacatgatgtgtctagaggtactgcccgagctcgtcaattcttacaggat
ttcactcagttgcctctggataagatggatctaaagcaggccttgcaacagttgagccaa
atgaagaccgaccttgagaagaatgcagttgacagtcagtggcttcagcagttctttagt
tcttcagattag

DBGET integrated database retrieval system