KEGG   Solanum tuberosum (potato): 102599050
Entry
102599050         CDS       T02981                                 
Name
(RefSeq) autophagy-related protein 13a
  KO
K08331  autophagy-related protein 13
Organism
sot  Solanum tuberosum (potato)
Pathway
sot04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:sot00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    102599050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sot04131]
    102599050
   03029 Mitochondrial biogenesis [BR:sot03029]
    102599050
Membrane trafficking [BR:sot04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    102599050
   Atg1 complex
    102599050
Mitochondrial biogenesis [BR:sot03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    102599050
SSDB
Motif
Pfam: ATG13
Other DBs
NCBI-GeneID: 102599050
NCBI-ProteinID: XP_006347547
UniProt: M0ZIN6
LinkDB
Position
Un
AA seq 604 aa
MDFQSNPQGEYGRFEQILAQFLLKTLHIVMDCRVPSIRPCGRSGEVKKSDKWFNLVLGDR
PAVLDNLNFWHRNLMEPMIIDIIIVQEKHSSLSEHSSGIAGAYTETIIERWVVQYEYMRT
MVPQIGDSSYKKTYKKSIILLRALYSMMRLLPAFKAFRKLSSSQSCDFDIIYKVSSFSAP
FSRVEEELMKHYTFTPVDAQQGRLCISVTYREDLSNFNLETAASFPPEIITDYVGSPLAD
PMRSFPSTSSDKGGHPTSFPSRGTHSSSSSPFQRPHSWTSGFLTSPSLPRTQPYVGSPPL
YRPPHELSSSPSDVHGHRVSPNNRLPIHHKATSFDEYQLSPPFSPSPSPSPPTYLSGANP
GQTRLRSGSGPVSIPHPMMGTSSRYLSPNLSDPNRHSLPPMSPRSIKHDSSSQESPSGIR
SFRKMDPLRTLESNIGTTSPGQKISRDVRDDSGRFSGLLSSSGSPRIFSRSSSRLSFQDD
LDVCDFSCPFIVDDVDTSDSQASEILDGRKGSEISSQASATTRKSQDAAVGALVHMLRTA
PPLRQDSSCYTSNSIKTELDGELSTASGFFISRKSSDALEELKTYKDLKDLLLSKSATRS
VSEG
NT seq 1815 nt   +upstreamnt  +downstreamnt
atggactttcagagtaacccacaaggtgaatatggaaggtttgaacagatacttgctcaa
tttctgctgaaaaccttgcatattgttatggactgtagagttccttctatacgcccttgt
ggacgtagtggggaagtgaaaaagagtgacaagtggttcaatttggtgttgggagatcgg
cctgctgttctggataatttgaatttttggcatagaaatttgatggaaccaatgataata
gacataataattgttcaagagaaacatagttcgttgtcggagcatagttcaggtattgca
ggggcatataccgaaaccattatagagaggtgggttgtacaatatgagtatatgaggaca
atggttcctcaaattggtgattcgtcttataagaaaacatacaagaaatcaattatactg
ctccgcgccctttattcaatgatgagactccttcctgcattcaaggccttcaggaaactt
tcatcaagtcagagctgtgactttgatatcatttacaaagtctcttcatttagtgctcca
ttctccagggtagaggaggagttgatgaagcactatacttttactccagttgatgcccag
cagggtcgtctttgtatatctgtgacatatcgtgaagatctgtcgaactttaacctggag
actgctgcatcctttccacctgagatcattacagattatgtaggcagtcctcttgctgac
ccgatgaggtcatttccatccacctcatctgataagggtggacaccctacatcatttccg
tcgagagggacacattcatcttcttcatcacctttccagcgcccacacagttggacaagt
ggtttcctcacgtcaccttctttacctcggacacagccatatgtaggatctccacctttg
taccggccaccacatgagctttcatcttcacccagtgatgtacatggacacagggtttca
cctaacaacagactgcccattcaccacaaagcaacgagctttgatgaataccagctttca
cctccattttcaccttctccatctccatcgccaccaacatatctgtcaggtgcaaatcct
gggcagactcgtttgcgttctggatctggccccgtcagtatccctcatccaatgatgggt
acaagttccagatacctatctcctaatttgtctgatccgaacaggcattcacttcctcca
atgtctcccagaagtataaagcatgattcatcatcccaagaatccccttcaggtatcagg
tcattcaggaaaatggatccactgaggactcttgaatcgaatatcggcactaccagtcct
ggacaaaagatttccagagatgttagagatgattctggacggttctctggtttgctatct
tcaagtggttcgccacgtatattttctagaagttctagcagactatcttttcaagatgac
ttggatgtctgtgatttttcctgtccttttattgttgatgatgtcgacacttccgattct
caagccagtgagatccttgatgggagaaaaggttcagaaatctcttctcaggcatctgca
acaaccagaaaatcccaagatgcagctgtaggtgctcttgttcacatgctgagaactgct
cctcctttgcgccaagattctagctgttatacctcgaatagcataaagactgaactggat
ggagaacttagcactgcatctggatttttcattagtagaaagtcatccgatgcgttggag
gagctcaaaacttacaaagatttgaaagatctacttctgtccaagagcgcaacccgttca
gtcagtgagggttga

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