KEGG   Solanum tuberosum (potato): 102599072
Entry
102599072         CDS       T02981                                 
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03013  Nucleocytoplasmic transport
sot03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102599072
   03015 mRNA surveillance pathway
    102599072
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sot03019]
    102599072
   03041 Spliceosome [BR:sot03041]
    102599072
Messenger RNA biogenesis [BR:sot03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     102599072
Spliceosome [BR:sot03041]
 Complex C
  Other components
   EJC/TREX
    102599072
SSDB
Motif
Pfam: Pinin_SDK_memA DNA_pol3_delta
Other DBs
NCBI-GeneID: 102599072
NCBI-ProteinID: XP_015166150
UniProt: M1CX12
LinkDB
Position
Un
AA seq 420 aa
MASGVVEKTEEELRKELFELNRQQREITERLKDPRGLRRGGFSGGGGGGPRNFVANGGRQ
RGVVRPAERNDAEDQPAPKRRISSAVVKIEEGEIAEDVSGAPRDANKEESIVEASPREAP
ANQNERKPSNWLRRDGYQRPSKMDFDIPPPEPVPRVLPKNEDPKLVSRNKRMLGQLLGTL
EKFRKEDMQLSGTEAYMRRSDSLKRAEQRAREDSEKLRQQEREQLDEKLKRDLTLRARLA
AKAEEKRLELLFLRWSEHHKKLANFIRTKAEPPIFYSFAKPLEEDPTLLEQRKDQIFEEW
KAARREELSQYQKKIAEQNVAKAEEEWKTILERRANKNVANLQETMDKELETHRLERGPK
TRKIPGVSNNEDEDVEDINVAEDDMMDDVLEVDENNQRSDENVKVEAGNGSPQIDNNDEQ
NT seq 1263 nt   +upstreamnt  +downstreamnt
atggcgagcggcgtagtggagaagacggaggaagagcttcgcaaagaactctttgaactc
aataggcaacaacgcgagattactgagcggcttaaggatccaagaggtcttcgccgcggt
ggattctccggcggcggtggcggaggtccacggaattttgttgccaatggtggtcgccaa
cgcggcgttgttagacctgcggagaggaatgatgcagaggatcagccagcacctaaaagg
cgtatttcttctgctgttgtgaagattgaagagggggagattgctgaggatgtatccgga
gcaccaagggatgcaaataaggaagagtcaattgtggaggcaagcccaagggaggcacct
gccaaccagaatgaaagaaagccatccaattggctccggagagatggctatcaaaggcca
tccaaaatggattttgatatacctccaccagagcctgtgcctagagtgttacccaaaaac
gaggatcctaaattggttagtaggaataagagaatgttggggcagctgctggggaccttg
gagaaattccggaaagaagacatgcagctttcagggactgaggcttacatgcggaggtca
gattctttgaaaagggctgagcaaagggcgcgcgaagacagtgagaaattaagacaacaa
gagcgggagcagcttgatgaaaagctgaaaagagatctgactcttcgagcacgtcttgct
gctaaagctgaggagaagaggctggaattgctgtttcttcggtggagtgagcaccacaaa
aaactagccaattttataaggaccaaagccgagccaccgatcttttattcttttgccaaa
ccattggaagaagatccaaccttacttgagcagagaaaagatcagatattcgaggaatgg
aaagctgcaaggagagaggaattgtcgcaataccagaaaaaaattgctgaacaaaatgtt
gcaaaagctgaggaggaatggaaaactattttagaaaggagagccaacaaaaatgtagca
aaccttcaagagacgatggacaaagagctagagactcataggcttgagcgtggacccaag
actcgaaagattcccggtgtcagcaacaacgaagatgaggatgttgaggatatcaatgtt
gcggaggatgatatgatggatgatgtgcttgaagtggatgagaataaccagaggagtgat
gaaaatgtaaaagttgaagcaggcaatggtagtccacagattgataacaatgatgagcag
tag

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