Solanum tuberosum (potato): 102599072
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Entry
102599072 CDS
T02981
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03013
Nucleocytoplasmic transport
sot03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102599072
03015 mRNA surveillance pathway
102599072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102599072
03041 Spliceosome [BR:
sot03041
]
102599072
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102599072
Spliceosome [BR:
sot03041
]
Complex C
Other components
EJC/TREX
102599072
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_memA
DNA_pol3_delta
Motif
Other DBs
NCBI-GeneID:
102599072
NCBI-ProteinID:
XP_015166150
UniProt:
M1CX12
LinkDB
All DBs
Position
Un
AA seq
420 aa
AA seq
DB search
MASGVVEKTEEELRKELFELNRQQREITERLKDPRGLRRGGFSGGGGGGPRNFVANGGRQ
RGVVRPAERNDAEDQPAPKRRISSAVVKIEEGEIAEDVSGAPRDANKEESIVEASPREAP
ANQNERKPSNWLRRDGYQRPSKMDFDIPPPEPVPRVLPKNEDPKLVSRNKRMLGQLLGTL
EKFRKEDMQLSGTEAYMRRSDSLKRAEQRAREDSEKLRQQEREQLDEKLKRDLTLRARLA
AKAEEKRLELLFLRWSEHHKKLANFIRTKAEPPIFYSFAKPLEEDPTLLEQRKDQIFEEW
KAARREELSQYQKKIAEQNVAKAEEEWKTILERRANKNVANLQETMDKELETHRLERGPK
TRKIPGVSNNEDEDVEDINVAEDDMMDDVLEVDENNQRSDENVKVEAGNGSPQIDNNDEQ
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggcgtagtggagaagacggaggaagagcttcgcaaagaactctttgaactc
aataggcaacaacgcgagattactgagcggcttaaggatccaagaggtcttcgccgcggt
ggattctccggcggcggtggcggaggtccacggaattttgttgccaatggtggtcgccaa
cgcggcgttgttagacctgcggagaggaatgatgcagaggatcagccagcacctaaaagg
cgtatttcttctgctgttgtgaagattgaagagggggagattgctgaggatgtatccgga
gcaccaagggatgcaaataaggaagagtcaattgtggaggcaagcccaagggaggcacct
gccaaccagaatgaaagaaagccatccaattggctccggagagatggctatcaaaggcca
tccaaaatggattttgatatacctccaccagagcctgtgcctagagtgttacccaaaaac
gaggatcctaaattggttagtaggaataagagaatgttggggcagctgctggggaccttg
gagaaattccggaaagaagacatgcagctttcagggactgaggcttacatgcggaggtca
gattctttgaaaagggctgagcaaagggcgcgcgaagacagtgagaaattaagacaacaa
gagcgggagcagcttgatgaaaagctgaaaagagatctgactcttcgagcacgtcttgct
gctaaagctgaggagaagaggctggaattgctgtttcttcggtggagtgagcaccacaaa
aaactagccaattttataaggaccaaagccgagccaccgatcttttattcttttgccaaa
ccattggaagaagatccaaccttacttgagcagagaaaagatcagatattcgaggaatgg
aaagctgcaaggagagaggaattgtcgcaataccagaaaaaaattgctgaacaaaatgtt
gcaaaagctgaggaggaatggaaaactattttagaaaggagagccaacaaaaatgtagca
aaccttcaagagacgatggacaaagagctagagactcataggcttgagcgtggacccaag
actcgaaagattcccggtgtcagcaacaacgaagatgaggatgttgaggatatcaatgtt
gcggaggatgatatgatggatgatgtgcttgaagtggatgagaataaccagaggagtgat
gaaaatgtaaaagttgaagcaggcaatggtagtccacagattgataacaatgatgagcag
tag
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integrated database retrieval system