KEGG   Solanum tuberosum (potato): 102599083
Entry
102599083         CDS       T02981                                 
Name
(RefSeq) RNA polymerase sigma factor sigC
  KO
K03093  RNA polymerase sigma-I factor
Organism
sot  Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:sot00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sot03021]
    102599083
Transcription machinery [BR:sot03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     102599083
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 HTH_31 XRN_N
Other DBs
NCBI-GeneID: 102599083
NCBI-ProteinID: XP_006355305
UniProt: M1CE25
LinkDB
Position
Un
AA seq 555 aa
MGFRLHLKWGFSVQPPFSSNSSSWPSSHSFKGREALYDPARSLKPFITGDCEPSHSDPFR
VQTCLSDPQLWTSDTSVTTEIKTRNGRGSPSNVYGDIGSHKIGISPDGEKPTYLNTTKSL
HFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHSSTFPKVLDV
PRELIKEVEKDDLVGNAIDKVVVRSRKKQERKSRRNRASRNANDIITVQPHTKNIQEDLQ
QPKFYSGKRTQASRNKRQKIAKNEAEMSRGVKLVAQLERIRSILEEETGRVATFSSWAEA
AGIEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAV
RFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIHKARKTLSRSHGKF
PADDEIAKFTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTPDKSITSPEETVMR
QDIVDNMYSLLESLDPKEQQVIYFRFGLETHQRKSLEEIGRLYGVSKEWIRRIERRALTK
LRNADYFQHITHYSM
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgggttttaggctgcatctcaaatggggtttctctgtccaaccccctttctcctccaat
tcatcatcatggccttcttcacattctttcaaaggacgggaagctttatacgatccagct
aggtctcttaaaccttttataactggcgactgtgaaccttcacacagtgatcctttcagg
gtgcagacttgtttatctgacccccaactgtggactagtgatacatcagtaactacagaa
ataaagacgcgaaatggcagagggtcccctagcaatgtatatggagatattggcagtcat
aagattgggatatcgcctgacggggagaaaccaacatatttaaatacaaccaaatctctt
cattttagtttactaatgaaaaatcttgatctgctggaaaacatgtttgctgattcagag
atgtcaagattagaaagagatattttggtgcaactagaaaagcttggagctttagaattc
tttcatacttgtctctcaaggacacatcattcttctacttttcctaaggttcttgatgtg
ccaagggagcttattaaagaagttgagaaagacgaccttgttggaaatgcaatagataag
gttgtcgtacgttctaggaaaaagcaagagcggaagtcaagaagaaacagagcatccaga
aatgccaatgacattattacagtgcagccgcataccaaaaacatccaggaggatttgcaa
cagccaaagttctattctgggaaaagaacacaagcctctagaaataaaagacagaaaatt
gctaagaatgaggcagaaatgtcaagaggtgttaagttggtggcacagttggaaaggatc
aggtcaatccttgaagaagaaactggtcgagtagctactttcagtagctgggcagaagct
gctgggattgaacagaaggagctgcagcaacgcctgcattttggttggtactgcagggat
gagcttctgaaaagtacacggtccttagtcttatatctggcaagaaactacagggggctt
ggagtggcatttgaagacttaattcaggctggaaacatgggtgttctacaaggtgctgta
aggtttgaccacactaggggatacaaattctcaacttacgttcagtattggatacgaaaa
tcattgtcaaaattggtggcacaacatgccagaggggttcgaattcccttcactatatgc
aaagtaataaatcaaatacataaagctcgaaaaactctcagtaggagccatggaaaattt
ccagctgacgatgaaattgccaagttcacgggtctatccacagctcggattgcaatggct
agtaaatgtctgagagttgttggttcaattgatcagaaagttggagattgcatcagcgca
aaagttttggaactcacacccgataaatcaattacaagcccagaggaaactgtcatgagg
caagacatagtagacaacatgtattctcttttggaaagtttggatccaaaagagcagcaa
gtaatatattttaggtttggtcttgaaactcatcaacgcaaatcactcgaggagattggg
aggctttatggagttagtaaagaatggattaggagaatagaacgaagagctctcaccaaa
ttaagaaacgcggattatttccaacatataactcattactctatgtag

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