Solanum tuberosum (potato): 102599083
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Entry
102599083 CDS
T02981
Name
(RefSeq) RNA polymerase sigma factor sigC
KO
K03093
RNA polymerase sigma-I factor
Organism
sot
Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sot03021
]
102599083
Transcription machinery [BR:
sot03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
102599083
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
HTH_31
XRN_N
Motif
Other DBs
NCBI-GeneID:
102599083
NCBI-ProteinID:
XP_006355305
UniProt:
M1CE25
LinkDB
All DBs
Position
Un
AA seq
555 aa
AA seq
DB search
MGFRLHLKWGFSVQPPFSSNSSSWPSSHSFKGREALYDPARSLKPFITGDCEPSHSDPFR
VQTCLSDPQLWTSDTSVTTEIKTRNGRGSPSNVYGDIGSHKIGISPDGEKPTYLNTTKSL
HFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRTHHSSTFPKVLDV
PRELIKEVEKDDLVGNAIDKVVVRSRKKQERKSRRNRASRNANDIITVQPHTKNIQEDLQ
QPKFYSGKRTQASRNKRQKIAKNEAEMSRGVKLVAQLERIRSILEEETGRVATFSSWAEA
AGIEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAV
RFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIHKARKTLSRSHGKF
PADDEIAKFTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTPDKSITSPEETVMR
QDIVDNMYSLLESLDPKEQQVIYFRFGLETHQRKSLEEIGRLYGVSKEWIRRIERRALTK
LRNADYFQHITHYSM
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgggttttaggctgcatctcaaatggggtttctctgtccaaccccctttctcctccaat
tcatcatcatggccttcttcacattctttcaaaggacgggaagctttatacgatccagct
aggtctcttaaaccttttataactggcgactgtgaaccttcacacagtgatcctttcagg
gtgcagacttgtttatctgacccccaactgtggactagtgatacatcagtaactacagaa
ataaagacgcgaaatggcagagggtcccctagcaatgtatatggagatattggcagtcat
aagattgggatatcgcctgacggggagaaaccaacatatttaaatacaaccaaatctctt
cattttagtttactaatgaaaaatcttgatctgctggaaaacatgtttgctgattcagag
atgtcaagattagaaagagatattttggtgcaactagaaaagcttggagctttagaattc
tttcatacttgtctctcaaggacacatcattcttctacttttcctaaggttcttgatgtg
ccaagggagcttattaaagaagttgagaaagacgaccttgttggaaatgcaatagataag
gttgtcgtacgttctaggaaaaagcaagagcggaagtcaagaagaaacagagcatccaga
aatgccaatgacattattacagtgcagccgcataccaaaaacatccaggaggatttgcaa
cagccaaagttctattctgggaaaagaacacaagcctctagaaataaaagacagaaaatt
gctaagaatgaggcagaaatgtcaagaggtgttaagttggtggcacagttggaaaggatc
aggtcaatccttgaagaagaaactggtcgagtagctactttcagtagctgggcagaagct
gctgggattgaacagaaggagctgcagcaacgcctgcattttggttggtactgcagggat
gagcttctgaaaagtacacggtccttagtcttatatctggcaagaaactacagggggctt
ggagtggcatttgaagacttaattcaggctggaaacatgggtgttctacaaggtgctgta
aggtttgaccacactaggggatacaaattctcaacttacgttcagtattggatacgaaaa
tcattgtcaaaattggtggcacaacatgccagaggggttcgaattcccttcactatatgc
aaagtaataaatcaaatacataaagctcgaaaaactctcagtaggagccatggaaaattt
ccagctgacgatgaaattgccaagttcacgggtctatccacagctcggattgcaatggct
agtaaatgtctgagagttgttggttcaattgatcagaaagttggagattgcatcagcgca
aaagttttggaactcacacccgataaatcaattacaagcccagaggaaactgtcatgagg
caagacatagtagacaacatgtattctcttttggaaagtttggatccaaaagagcagcaa
gtaatatattttaggtttggtcttgaaactcatcaacgcaaatcactcgaggagattggg
aggctttatggagttagtaaagaatggattaggagaatagaacgaagagctctcaccaaa
ttaagaaacgcggattatttccaacatataactcattactctatgtag
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