Solanum tuberosum (potato): 102599174
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Entry
102599174 CDS
T02981
Name
(RefSeq) transcription initiation factor IIF subunit alpha
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102599174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sot03021
]
102599174
Transcription machinery [BR:
sot03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
102599174
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
Motif
Other DBs
NCBI-GeneID:
102599174
NCBI-ProteinID:
XP_006352364
LinkDB
All DBs
Position
Un
AA seq
538 aa
AA seq
DB search
MSIDLILKPSCSRCGSSSDLYGSSCKHLTLCLSCGKNMAETRDKCYECGTPVTRLIREYN
VRACSSNDKNHFIARFASGLPKFSKKKNDSKWTLQKEGLQGRQVTDTLREKYKNKPWLLE
DETGQFQFHGHLEGAQSAQYYLLMMQGEELFAIPAGSWYNFNKVAQYKQLTLEEAEEKMK
NRRKTADGYQRWMMKAANNGPAAFGEVERFDDKEGGSGGTRGRKKTSGDEDEGNASDHGD
EDEEEEAARKNRLGLNKRGIDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAVGN
DPEEREDLAPEIPAPPEIKQDEDDEEEGEEEGGGLSKSGKELKKLLGKANGLNESDAEDD
DDDDDTEEDISPVLAPKPKEAPKEEPVETNSPLKPAASGSNRGTPTSKSAKTKRKANGDE
SKPTSGAPLKKVKTETDAKPGKDETPSSAKNSALPKGASSSSKTAPSPATGPVTEDEIRA
VLLQRKPVTTQDLVSQFKSRLKCKEDKAAFAEVLRKISKIQKTTTGSSYVVLRERTNQ
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatagatttgattctgaaaccttcatgtagcaggtgtggttcatcctcggatctg
tatggaagctcatgcaagcatttgactctctgtttgtcttgtggtaaaaacatggctgag
actcgtgataagtgctatgagtgtggaactccagttacacgattgattcgagagtataat
gttcgggcttgctccagcaatgacaagaatcatttcattgctagatttgcttcaggctta
cctaaattttcaaaaaaaaagaatgacagtaaatggactttacaaaaagaaggtttgcaa
ggacgtcaagttacagatactttgcgggagaagtacaaaaataaaccatggctattagag
gatgaaactggtcaatttcagttccatggtcatcttgagggagcacagtcagcacaatat
tatctactgatgatgcagggtgaagagttatttgctattcctgctggttcttggtataac
ttcaacaaagtagcccaatataagcaacttactctggaggaagcagaagagaaaatgaaa
aatagaagaaaaactgctgatgggtaccagagatggatgatgaaagcagcaaataatggg
cctgctgccttcggtgaagtagaaagatttgatgacaaagaaggtggatctggtgggaca
agggggcgtaagaaaacttctggtgatgaggacgaaggcaatgcatcagaccatggggat
gaagatgaggaagaggaggctgctaggaaaaacaggttaggactcaacaaaagaggcatt
gatgatgatgaagagggtcctagagggggcgatcttgacctcgatgatgatgatattgaa
aaaggggatgactgggagcatgaggagatttttacggatgatgatgaagctgttgggaat
gatcctgaggagagggaggatttggctcctgaaattcctgctcctccagagattaagcag
gatgaagatgacgaggaggaaggtgaagaagagggaggtggtttgagcaaatctggaaag
gagctgaaaaagttgcttggaaaagccaatggattgaatgaatcagatgctgaggatgac
gacgatgatgatgatacagaagaagatatttcgcctgtattagctcctaagccgaaggaa
gcacctaaagaagaaccggttgagaccaacagtcctttgaaaccagctgcttctggatcc
aaccgtggaactccaacttcaaagtcagctaagactaaaagaaaagctaacggagatgag
tcgaaaccaactagtggtgctcccttgaaaaaagtgaaaacagagacggatgccaaacct
gggaaagacgaaaccccatcttctgcaaagaacagtgctcttccaaagggtgcatcatcc
tcttccaaaactgctccaagtcctgccacaggtcctgttactgaagatgaaattagagct
gttctactgcagagaaaaccagtgaccacacaggatcttgtcagccaatttaaatctcgt
ttgaaatgtaaagaggataaggctgcttttgctgaagtattgaggaagatctccaagata
cagaagactactacaggaagtagctatgtcgtgttacgagagaggacaaatcaatag
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