KEGG   Solanum tuberosum (potato): 102599911
Entry
102599911         CDS       T02981                                 
Name
(RefSeq) uncharacterized LOC102599911
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    102599911
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sot03021]
    102599911
   03019 Messenger RNA biogenesis [BR:sot03019]
    102599911
Transcription machinery [BR:sot03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     102599911
Messenger RNA biogenesis [BR:sot03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     102599911
SSDB
Motif
Pfam: NUFIP1
Other DBs
NCBI-GeneID: 102599911
NCBI-ProteinID: XP_006347710
UniProt: M1CMQ1
LinkDB
Position
Un
AA seq 690 aa
MLPGRNSRPQHPSKLQANGTAPSPPLQVMGNPGSFMPNHMQIQSQMAIPNNNPNTQFFPG
QLLAYQMNQMNNANSQQKGQFLGQNIVNPPQFLNQNVGFGVMPNPMQNMNQFLQMQMAMQ
MASYAQALSGSVPMYPNQVPQGMGIQNSNTAMNNAHLGHANASGNLSKQMANGSQQLQGQ
SPVMNSFGVVQQPQTQNFNAHASANPQVSQGMGPQSSNFGMNAHLGLVNANVAAQQSKNG
LSKQMPNATQQLLGQLPLMNSFDFVQQPQTQNFNPPASANTQVCQGIGPQIPNFSMNAHL
GLLNANGAVQQMPNVNQQLLGQLPMMNQFGFVQQPQTQNFNAPASTNTQANPGCVVGINP
SKGNQQNSYNSNFSRNQKHGAKMSKFGKGKFSTHNKNLEKGHHRNREKKNIDINSVKPEM
EKKRPLLVTYSAQEIQQWRDERRKNYPSKGNIEKQLTGKMVESEDNSCAAKLRRQQLKEI
LAKQAELGFEVAEIPSSYLSDTEKQVDGMEQKRPLSRKERFQKRFNKKEKFNRNDRFSKK
RRFGNSDSSNTCDQKGFPAGKQDVNRESVTQVTKSARESTLLEKLLSSDIRRDKRRLLQV
FRFMTMNSFFKDQPGKPLRFPRVLLKETGKEIEAAEEISDVIDTNIEKSSSDNDNDEEDN
IAEFTEAVSSELQENSSSESEEPEEEQISG
NT seq 2073 nt   +upstreamnt  +downstreamnt
atgttaccgggtagaaattcacggcctcagcatccttctaagcttcaggccaatggaact
gctccttcacctcccctgcaggttatgggtaacccaggaagttttatgccaaaccatatg
caaattcagtctcagatggcaattccaaacaataacccgaatacccagtttttccctggg
cagcttttggcataccaaatgaatcagatgaataatgctaattctcaacaaaaaggtcaa
ttcttggggcaaaatattgttaacccacctcagttcttgaatcagaatgttggttttggg
gttatgcccaatccaatgcaaaatatgaatcagtttctgcaaatgcaaatggctatgcaa
atggcaagttatgctcaggctctttcagggagtgttcccatgtatccaaaccaggtgcct
cagggtatgggaattcaaaattctaacactgcgatgaataatgcgcatttgggtcatgcg
aatgcaagtggaaatttgtctaagcaaatggctaatgggagtcagcaattgcaagggcag
tcgccggtgatgaactcttttggtgttgttcagcagccacagactcagaacttcaatgct
catgcttctgctaatccacaggtttctcagggtatgggccctcaaagctccaactttggt
atgaatgcacatttgggtcttgtgaatgccaatgtagccgcccagcagtctaagaatggc
ttgtctaagcaaatgcctaatgcgactcagcaattgctaggccagttgcctctgatgaat
tctttcgactttgttcagcagccacaaactcagaactttaatcctcctgcttctgctaat
acacaggtatgtcagggtatagggcctcaaattcccaacttttctatgaatgcgcatttg
ggtcttttgaatgccaatggagctgtccagcaaatgcctaatgtgaatcagcaattgcta
ggccagttacctatgatgaatcagtttggctttgttcagcagccacaaactcagaacttc
aatgctcctgcttctactaatacacaggcaaatcctggatgtgttgttgggattaaccca
tcaaaaggcaaccagcaaaattcttataatagtaacttctcgaggaatcaaaagcacgga
gctaagatgtccaagtttggtaaagggaagttctcaactcataataaaaacctggaaaaa
ggtcatcacagaaatagggagaaaaaaaatattgatattaattcagtgaaacctgagatg
gagaaaaagagacctctcttggtgacttactcggcgcaagaaattcaacagtggcgggac
gaacgccgtaagaactacccttcaaaaggaaacattgagaagcagctgacagggaaaatg
gtagagtccgaggataattcgtgtgctgccaagttgcgccgtcagcaacttaaggaaatt
ctagccaagcaggctgagttaggctttgaagttgcagaaataccatcatcctatctgtca
gatactgagaaacaagtggatggaatggagcaaaaaaggccgctgagtagaaaagaaagg
ttccaaaaaaggttcaataaaaaagaaaagttcaaccgaaatgatcgtttctccaagaaa
cgaagatttggaaactccgattcatcaaatacttgtgatcaaaagggctttcctgcagga
aaacaggatgtaaaccgtgaatctgtaactcaggttacaaaaagtgcgagagaatcaaca
ctgctggagaaactattgagttcagatattcgaagagataaacgacgcctattgcaggtc
tttaggttcatgaccatgaattctttctttaaagatcagccggggaaacccttgaggttt
cctcgagtgttacttaaggaaacagggaaagaaattgaagctgctgaagaaatatctgat
gttatagatacaaacattgaaaaatcatcatcagacaacgacaacgacgaagaagataat
attgctgaatttacagaagcagttagtagtgagttacaagaaaatagtagcagtgaaagt
gaagaacctgaggaagaacaaatctctggttaa

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