Solanum tuberosum (potato): 102600114
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Entry
102600114 CDS
T02981
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sot
Solanum tuberosum (potato)
Pathway
sot04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102600114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102600114
03009 Ribosome biogenesis [BR:
sot03009
]
102600114
04131 Membrane trafficking [BR:
sot04131
]
102600114
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sot04147
]
102600114
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
102600114
Ribosome biogenesis [BR:
sot03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
102600114
Membrane trafficking [BR:
sot04131
]
SNARE
SNARE associated proteins
Others
102600114
Autophagy
Aggrephagy
Other aggrephagy associated proteins
102600114
Exosome [BR:
sot04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102600114
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_18
AAA_17
AAA_28
Mg_chelatase
nSTAND3
ATPase_2
IstB_IS21
AAA_lid_PRS2_C
Vps4_C
Viral_helicase1
Parvo_NS1
ABC_tran
AAA_7
NACHT
TsaE
NB-ARC
DUF815
RCF1-5-like_lid
Zot
Motif
Other DBs
NCBI-GeneID:
102600114
NCBI-ProteinID:
XP_006344438
UniProt:
M1BJD2
LinkDB
All DBs
Position
Un
AA seq
810 aa
AA seq
DB search
MADPNSSTSDSKNNKKDFATAILERKKSPNRLIVDEAINDDNSVVSMHPAKMEELQLFRG
DTVLLKGKKRKDTVCVVLADEQCEEHKIRLNKVVRANLRIRLGDVVSVHQCPDVKYAKRV
HILPIDDTIEGMTGNLFDAYLKPYFLESYRPVRKGDLFVVRGGMRSVEFKVVETEPGEYC
VVAPDTEIFCEGEPIKREDEERLNEVGYDDVGGMRKQMAQIRELVELPLRHPQLFKSIGV
KPPKGILLYGPPGSGKTLIGRAVANETGAFFFLINGPEIMSKLAGESEGNLRKAFEEAEK
NAPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRSHVVVMGATNRPNSIDP
ALRRFGRFDREIDIGVPDEIGRLEILRIHTKNMKLDDNVDLERVARDTHGYVGADLAALC
TEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQAALGASNPSALRETVVEVPNTS
WEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC
QANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGG
AADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEASRLQ
IFKACLRKSPVAKDVDLSALSRYTRGFSGADITEICQRACKYAIRENIEKDIERERKRSV
NPEAMDEDDTDEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGLGTEFKFA
EHAANATPTGATADPFASVNAAGDEDDLYS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccgaactcttccacttccgactcgaaaaacaataaaaaagattttgctact
gcaattttggagaggaagaaatctcctaaccgccttattgttgatgaggccataaatgat
gataattcagtggtatctatgcaccctgctaaaatggaagagctccagttgtttagagga
gatactgtattgctaaagggtaaaaaacggaaggacactgtttgtgtagtccttgcggat
gagcaatgtgaagaacataagatcagattgaacaaagtcgttcgggcgaaccttcggatt
cgtcttggggatgttgtatctgtgcaccagtgtcctgatgttaagtatgcgaagcgtgtt
catattcttccaattgatgatacaattgaggggatgactggcaacctgtttgatgcctac
ttgaagccatacttcttggagtcttaccgccctgtgaggaagggcgatctctttgtagtc
agaggtggcatgcgaagtgttgaatttaaagtggttgagacagaacctggagaatattgt
gttgttgcacctgatacagagatcttttgtgagggagaaccaatcaagcgtgaagacgag
gagagactaaatgaagttggatatgatgatgttgggggtatgaggaagcaaatggctcag
attcgtgagctggttgaactccctctgaggcatccacagttgttcaagtcaattggtgtg
aaaccaccgaaaggtattctcctgtatggtcctccaggatcggggaaaaccctgattgga
agagcggtggcaaatgagactggtgcctttttctttttgattaatgggcctgaaattatg
tccaaattggctggtgagagtgagggtaacttgaggaaggcatttgaggaagccgaaaag
aatgcgccgtctattatatttattgatgagttagactcgattgctccaaagagagaaaag
acacatggtgaagttgagcggcgaatagtttcccaacttttgacattaatggatgggctc
aagtctcgatcacatgtggttgtcatgggggctaccaacagaccaaacagtattgatcct
gctctcaggagatttggaagatttgatcgggagattgacattggcgtaccagatgaaata
gggcggctggagatcctacggattcatactaaaaacatgaagcttgatgataatgttgat
ctagagagggttgcaagagatacacatggttatgtcggagctgatcttgctgccttgtgc
actgaggctgcgctgcagtgtatcagggagaaaatggatgttattgacttggaggatgag
accattgatgctgaagtgttgaattcaatggctgtgactaatgagcattttcaagctgct
ctgggtgcttcaaatccatcagcactacgagaaacggtagtggaggttcccaatacctct
tgggaggatattgggggactggaaaatgtcaagcgggaacttcaagagactgttcagtat
ccggttgagcatcctgagaagtttgagaagtttggaatgtcaccctctaaaggggtactt
ttctatggaccacctggttgtggcaaaactttactggccaaagctattgcaaatgagtgt
caggctaactttattagtgtgaaagggccggagttgctcacgatgtggtttggagaaagt
gaagcaaatgttcgggaaatatttgacaaggcacggcaatctgctccatgtgtactgttc
tttgatgaactcgattccattgctacacagagaggaaattcagtgggagatgctggtggt
gctgctgatagagtactcaatcaattgttaacggagatggatggaatgacagcaaagaaa
acagttttcattattggggcaacaaataggccagacattattgaccctgcattgctcaga
ccaggtcgtctagaccaattaatttacatccccctcccggatgaagcttcccgtcttcaa
atcttcaaagcatgtttgcgtaagtcccccgtcgcaaaggacgtagatctgtcagctcta
tcacggtatacacgtggttttagtggtgcagacataactgagatttgtcagcgagcatgc
aaatacgccattagggaaaacattgaaaaggatattgagcgagagaggaagaggagcgtg
aaccctgaagccatggatgaagatgacactgatgaagtggctgaaataaaggctgcacac
tttgaggagtccatgaaatatgctcgaagaagtgtgagtgatgctgacattaggaagtac
caggcttttgctcaaacattacaacaatcacggggacttggaactgagttcaaatttgca
gagcatgcagctaatgctacaccaaccggggcaacagccgatccattcgcttctgttaat
gctgctggagacgaggacgacttgtacagttaa
DBGET
integrated database retrieval system
