Solanum tuberosum (potato): 102600295
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Entry
102600295 CDS
T02981
Name
(RefSeq) probable small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102600295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sot03019
]
102600295
03041 Spliceosome [BR:
sot03041
]
102600295
03032 DNA replication proteins [BR:
sot03032
]
102600295
Messenger RNA biogenesis [BR:
sot03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
102600295
Spliceosome [BR:
sot03041
]
Complex A
U1 snRNP components
Sm proteins
102600295
U2 snRNP components
102600295
Complex B
U1 snRNP components
102600295
U4/U6.U5 tri-snRNP components
102600295
Complex C
U2 snRNP components
102600295
DNA replication proteins [BR:
sot03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
102600295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
102600295
NCBI-ProteinID:
XP_006339211
UniProt:
M1CPZ1
LinkDB
All DBs
Position
Un
AA seq
88 aa
AA seq
DB search
MATVPVNPKPFLNNLTGKHVMVKLKWGLEYKGYLVSVDSYMNLQLANAEEFTDGVSSGSL
GEILIRCNNVLYLRGVPEDEELEDADRD
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagtaccagttaatccgaagccttttttgaacaatttgactggaaagcatgtg
atggtaaagctaaagtggggattagagtacaaagggtatttggtctctgtggattcatac
atgaacttgcagcttgctaatgcagaagaattcactgatggagtaagctctggctctctt
ggagagatcctgattagatgtaataatgtcctctatcttcgtggtgtacccgaggatgaa
gaactggaagatgctgaccgcgactag
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