Solanum tuberosum (potato): 102600354
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Entry
102600354 CDS
T02981
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot00040
Pentose and glucuronate interconversions
sot01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102600354
Enzymes [BR:
sot01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
102600354
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
102600354
NCBI-ProteinID:
XP_006348207
UniProt:
M1BCY8
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All DBs
Position
Un
AA seq
381 aa
AA seq
DB search
MASLALVLTLLLLGISTLQAEYYAPSKNYAPSTTKKTMNVIDSCWRAKSNWDKNRYALAD
CAVGYGKAAIGGKNGAIYVVTNPSDDPVNPKPGTLRYGAIQSKPLWIIFNKDMVITLKNE
LMINSYKTIDGRGAEVEIAYGPCITIQHVSHVIIHGISIHDCKPGKKGIVRDSPVHAGHR
NGADGDGIDIFQSTHVWIDHCYLARCTDGLIDVIHASTGVTISNNYFTQHDKVMLFGHND
NNIEDKVMKVTVAFNYFGPGLIERMPRVRLGYAHVANNRYEKWLMYAIGGSANPTIFSEG
NYFLASKSTQVTKRESKNGWQNWKWRSSKDKFLNGAYFIPSGYGTTNPYYSKAQSFPVAD
GSMVPSLTADAGPLRCTSYKC
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttagcacttgtacttactcttcttttattgggtatctcaactttacaagcc
gagtactatgcaccaagtaaaaactatgcaccttctactactaaaaaaactatgaacgtg
atcgattcatgttggcgtgccaagtcaaactgggacaagaatcgctatgcattagccgat
tgtgctgtcggctacggcaaagcagctatcggtgggaaaaacggtgcgatatacgtcgtt
actaatccgtccgacgacccggttaaccctaaaccgggtacactaagatatggtgcaatc
caatctaaaccactatggattattttcaacaaggatatggttataacgttaaagaatgaa
cttatgatcaatagttacaagactattgatggaaggggtgcagaagttgaaattgcatat
ggaccttgtataacaatccaacatgttagtcatgtgattatacatgggataagtatacat
gattgtaagccggggaaaaaaggtatcgtccgggatagtccggtgcatgccggccatcgt
aacggcgccgacggagacggcattgatatatttcaatcgacccatgtttggatcgaccat
tgttatcttgcacgttgcaccgatggacttattgacgttatccatgcttctactggtgtt
accatttcaaataactacttcactcagcatgataaagttatgttatttgggcacaatgat
aacaatatagaagataaggttatgaaagtcacagtagccttcaactactttggccctggt
ttaattgaaagaatgccaagagtgaggctaggttatgctcatgtggccaacaatcgttac
gaaaaatggttgatgtatgctattggtggaagcgctaatccaaccatctttagtgaagga
aattatttcttggcatctaaatccacacaagttacaaaaagggaatctaagaatggatgg
caaaattggaagtggaggtcttcaaaagataaattcttgaatggagcctattttatacca
tctggttatgggactactaatccatattactcaaaggctcaatcatttcctgtggctgat
ggatctatggttccttctttaactgctgatgctggacctttgcgttgtacttcttataaa
tgttga
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