KEGG   Solanum tuberosum (potato): 102600444
Entry
102600444         CDS       T02981                                 
Name
(RefSeq) elongation factor 1-alpha-like
  KO
K03231  elongation factor 1-alpha
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102600444
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sot03019]
    102600444
   03016 Transfer RNA biogenesis [BR:sot03016]
    102600444
   03012 Translation factors [BR:sot03012]
    102600444
   04131 Membrane trafficking [BR:sot04131]
    102600444
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sot04147]
    102600444
Messenger RNA biogenesis [BR:sot03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     102600444
Transfer RNA biogenesis [BR:sot03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    102600444
Translation factors [BR:sot03012]
 Eukaryotic type
  Elongation factors
   102600444
Membrane trafficking [BR:sot04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    102600444
Exosome [BR:sot04147]
 Exosomal proteins
  Proteins found in most exosomes
   102600444
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 AAA_22 GTP_EFTU_D4
Other DBs
NCBI-GeneID: 102600444
NCBI-ProteinID: NP_001275481
UniProt: Q38HT2
LinkDB
Position
Un
AA seq 448 aa
MGKEKIHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDGAVWKVETTKYYCTVIDAPRGRDFIKNMITGTSQAGCAVLIIDSTT
GGFEAGISQDGQTRERALLAFTLGVKHMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDQINEPKRPTDKPLRLPLQD
VYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHEALLEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAKGAASFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFAEYPPLGRFAVRDMRQT
VAVGVVKNVDKKDPTGAKVTKAAQKKGK
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgggtaaagagaagattcacatcagtattgtggtcattggtcatgtcgactctggtaag
tcgaccacaactggtcacttgatctacaagcttggtggtattgacaagcgtgttattgag
aggtttgagaaggaagctgctgagatgaacaagaggtcattcaagtatgcctgggtgctt
gacaaacttaaggctgaacgtgagcgtggtatcactattgatggtgctgtgtggaaggtt
gagaccactaagtactactgcactgtgattgatgccccgcgaggcagggactttatcaag
aacatgatcactggtacctcccaggccggctgtgctgtcctcattattgactccaccact
ggtggttttgaagctggtatctctcaagatggtcagacccgtgaacgtgcattgcttgct
ttcacccttggtgtcaagcacatgatttgctgctgcaacaagatggatgctaccaccccc
aagtactccaaggctaggtacgatgaaattgtgaaggaagtttcttcctacctcaagaag
gttggttacaaccctgacaaaatcccatttgtccccatctctggttttgaaggagataat
atgattgagaggtctaccaacctcgactggtacaagggaccaaccctccttgatgctctc
gaccagattaatgagcccaagagaccaacagacaagccactccgtctcccacttcaggat
gtttacaagattggtggtattggaactgtcccagttggtcgtgtagagactggtgtgatc
aagcctggtatggttgtgacctttggccctactggtttgacaactgaagtcaagtctgtt
gagatgcaccacgaagctcttctggaggcactccctggtgacaatgttgggttcaatgtt
aagaatgttgctgttaaggatctgaagcgtggttttgttgcctcaaactccaaggatgac
ccagctaagggggcagccagtttcactgcccaggtcatcatcatgaaccatcctggccag
attggaaatggatatgcaccagtgctcgactgccacacttcccacattgctgtcaagttt
gctgagatcttgaccaagattgacaggcgttcaggtaaggaacttgagaaggagcctaag
ttcttgaagaatggtgatgctggtatggttaagatgattcccactaagcccatggttgtt
gagacctttgccgaatacccaccattgggtcgtttcgctgtgagagacatgaggcaaact
gttgctgtcggtgttgtcaagaatgttgacaagaaggacccaactggtgccaaggtcacc
aaggctgcccagaagaagggaaagtga

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