Solanum tuberosum (potato): 102600710 Help Entry 102600710         CDS       T02981                                  Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism sot  Solanum tuberosum (potato) Pathway sot03040   Spliceosome sot04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:sot00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     102600710   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     102600710  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:sot03041]     102600710    04121 Ubiquitin system [BR:sot04121]     102600710    03400 DNA repair and recombination proteins [BR:sot03400]     102600710 Enzymes [BR:sot01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      102600710 Spliceosome [BR:sot03041]  Complex B   Other components    Prp19 complex     102600710  Complex C    Prp19-CDC5 complex     102600710 Ubiquitin system [BR:sot04121]  Ubiquitin ligases (E3)   U-box type E3    102600710 DNA repair and recombination proteins [BR:sot03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     102600710 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_EML_2 Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_HPS5 NBCH_WD40 Beta-prop_SCAP Beta-prop_Aladin Beta-prop_DCAF12 PROPPIN PEP5_VPS11_N U-box Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_DCAF4 zf-Nse Beta-prop_VPS8 KNTC1_N Beta-prop_ACSF4 WD40_like WDR54 V_ATPase_I_N PAS_11 B_lectin PUMA_CC Motif Other DBs NCBI-GeneID:  102600710 NCBI-ProteinID:  XP_006354435 UniProt:  M1BFY0 LinkDB All DBs Position Un AA seq 521 aa AA seqDB search MNCSISGEVPEDPVVSKKSGLLFEKRLIERHISDYGKCPITGEPLTADDIIPVKTGKIVK PRPVQAASIPGMLGMFQIEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK ERDEARGLLAQAERQIPMAATTAVGTTAVSNGKRAAEDEDTGPDGKKIRPGISHSVIETL TECNAGLSQQRKKRQIPATLAPVDALARYTQLNSFPLHKTNKPGILSLDIHYAKDIIATG GVDSNAVIFDRPSGQIISTLSGHSKRVTSVKFAAEGELVVSGSADKTVRVWQSSENGNYD CRHVLKDHTAEVQAVTVHATNNYFVTASLDSTWCFYDLASGLCLAQVADASESEGYTSAA FHPDGLILGTGTSGSLVKIWDVKSQANVAKFDGHVGSVTAISFSENGYFLATAAHDGVKL WDLRKLKNFRTFAPYDENTPTQSVEFDHSGSYLALGGSDIRVYQVASVKADWNHIKTFPD LSGTGKATCLKFGPDASYIAVGSMDRNLRIFGLPGEDQMEG NT seq 1566 nt NT seq  +upstreamnt  +downstreamnt atgaactgttcaatttccggcgaggtgccggaggatccagtagtttcgaagaagtccgga ctccttttcgaaaagcgtttaattgaaagacatatctctgattatggcaaatgtcctatt actggagagccattgacggcagatgacattatccctgttaaaactggcaagatagttaaa ccccgacctgtacaggctgctagcattcctgggatgttgggaatgttccaaatagaatgg gatggcctgatgctgtcaaattttgcattggaacaacaattacatactgcaaggcaagag ctgagccatgctttatatcagcatgatgctgcttgcagggtaattgcaaggctgaaaaag gaaagggatgaggcaagggggttgcttgcccaggctgaaagacaaatacccatggcagcc actacagcagttggtactactgctgtaagcaatgggaaaagagctgctgaggatgaggat acgggccctgatggaaagaaaattcgccctgggatatcacactctgtcattgagactctt actgaatgtaatgctggtctttcacaacaaaggaaaaaacgacagataccggcaacattg gcccctgtggatgctttggcgagatatacccaactgaatagttttcctcttcacaaaacc aacaaaccgggcattttgtctttggatattcattatgctaaggacataattgctactggt ggagttgattcaaatgctgtgatctttgatcgaccttcaggacagatcatatcaacacta agtggtcattcaaagagggttaccagtgttaaatttgcggctgagggtgaactcgtggtc tctggttcagcagataagacggttcgtgtgtggcaaagttctgaaaatggaaattatgac tgtaggcatgtcttgaaggatcatacagcagaggtgcaagctgtcactgtccatgcaacc aataattattttgttactgcttctcttgatagcacgtggtgcttttatgatcttgcttct ggtttatgccttgcacaggtagcagatgcttcagaatctgagggctatacttccgcagct ttccaccctgatggtctgatccttggaactgggacttcagggtctctggtcaagatatgg gatgtaaaaagtcaggcaaatgttgcaaaatttgatggccatgttgggtctgtaactgct atttccttttcagaaaatggctatttcttagcaactgctgctcatgatggtgttaaactt tgggatttacgcaaattgaagaactttagaactttcgctccttatgatgaaaacacacca actcaatcagtggaatttgaccatagtggaagttatcttgccttaggaggctcagatata cgagtttatcaagtcgccagtgtcaaggctgattggaatcacatcaaaaccttccctgac ttatcaggcacaggcaaagcaacatgtctgaaatttggtccagatgcatcgtacatagct gtcggatctatggaccgcaatttaagaatattcgggctgcctggtgaggatcaaatggag ggttag

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